We promote interdisciplinary collaboration within FIU and beyond to address local and regional issues of environmental contamination. Over the course of this project, we will provide various tools to aid both internal and external partners in this collaborative work.
This page is a portal to our products and outcomes, including information from our original proposal, presentation slides about the Center and its projects, publications, application information for interested students, funding forms for current participants, citation information and project databases.
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Publications & Related Data
- 2024 Publications
Allen, A. C., Antonio A. Mignucci-Giannoni, & Kiszka, J. J. (2024) "Conservation challenges and emerging threats to the West Indian manatee (Trichechus manatus) in Florida and Puerto Rico," Latin American Journal of Aquatic Mammals, 19(1), 32-41. https://lajamjournal.org/index.php/lajam/article/view/1635
Almeida-Dias JMV, Morais MM, Belinato JR, Diogo YR, Miranda-Pinto P, Batista NM, Quinete NS, Nascimento FS, Francoy TM, De Jong D, Dias Cappelini LT. "Botanical origin and volatile organic compounds contents of bee bread from four Brazilian regions," Next Research. Submitted _ ID NEXRES-D-24-00846R1.
Alsayegh, J. Fuentes, L. Bobadilla and D. A. Shell, "Oblivious Markov Decision Processes: Planning and Policy Execution," 2023 62nd IEEE Conference on Decision and Control (CDC), Singapore, Singapore, pp. 3850-3857, https://ieeexplore.ieee.org/document/10383231
Annunziato, M., et al. (2024) "An Integrated Metabolomics-Based Model, and Identification of Potential Biomarkers, of Perfluorooctane Sulfonic Acid (PFOS) Toxicity in Zebrafish Embryos," Environmental Toxicology and Chemistry (Accepted).
Berrin Tansel, Yelena Katsenovich, Natalia Soares Quinete, Joshua Ocheje, Zariah Nasir, Maria Mendoza Manzano (2024) "PFAS in biosolids: Accumulation characteristics and fate profiles after land application," Journal of Environmental Management, Volume 370, 122395, ISSN 0301-4797. https://doi.org/10.1016/j.jenvman.2024.122395.
Brianna L. Martinez, Zahilyn Roche Allred, Sonia M. Underwood (2024) "A Qualitative Investigation of Undergraduate and Graduate Chemistry Students’ Perceptions of What Scientists Do," Journal of Chemical Education, 101, 10, 4071 – 4082. https://doi.org/10.1021/acs.jchemed.4c00334
Câmera LC, Diogo YR, Vital VG, Lira KDL, Ferreira VG, Dias Capellini LT, Vasconcellos SP, Morais MMA "Scientific Note on Microbial Diversity in Pollen Stored by Melipona quadrifasciata: A Comparative Study of Fermentation Stages," Apidologie. Submitted _ ID APID-D-24-00121R1.
Cardé, J., Litz, J., Brossard, A., Wicker, J., Contillo, J., Kiszka, J. "Long-term dynamics of the home range and fine-scale population structure of bottlenose dolphins in an urban lagoon in Southern Florida," Aquatic Conservation: Marine and Freshwater Ecosystems (Submitted).
Cardé, J., Caputo, M., Litz, J., Brossard, A., Wicker, J., Contillo, J., Kiszka, J. "Community-level variation of the foraging ecology of coastal bottlenose dolphins (Tursiops truncatus) in a subtropical lagoon experiencing significant seagrass decline in Southern Florida," Marine Ecology Progress Series (Submitted).
Ceccopieri, M.; Troxell, K.; Stephens, M.; Ding Y.; Gardinali, P. "Distribution, quality assessment and historical variation of trace metals in sediments from Deering Bay waterways (South Florida)," Marine Pollution Bulletin (Under Review).
Cassandra Fuller, Sabrina Mansoor, Kevin Jeanne Dit Fouque, Lilian Valadares Tose, Javier Rodriguez-Casariego, Maria-Aggeliki Kosmopoulou, Detlev Suckau, Francisca Nathalia Vitorino, Benjamin Garcia, Jose Eirin-Lopez, Francisco Fernandez Lima (2025) "Direct histone proteoform profiling of the unannotated, endangered coral Acropora cervicornis," Nucelic acids (Submitted).
Castillo NA, James WR, Santos RO, Cerveny D, Boucek RE, Adams AJ, Goldberg T, Campbell L, Perez AU, Schmitter-Soto JJ, Lewis JP, Fick J, Brodin T, & JS Rehage (2024) "Understanding pharmaceutical exposure and the potential for effects in marine biota: a survey of bonefish (Albula vulpes) across the Caribbean Basin," Chemosphere https://doi.org/10.1016/j.chemosphere.2023.140949
Castillo NA, James WR, Santos RO, Rezek RJ, Cerveny D, Boucek RE, Adams AJ, Trabelsi S, Distrubell A, Sanquist M, Fick J, Brodin T, & Rehage JS (2024) "Identifying pathways of pharmaceutical exposure in a mesoconsumer marine fish," Journal of Hazardous Materials https://doi.org/10.1016/j.jhazmat.2024.135382
Castillo NA, Santos RO, James WR, Rezek RJ, Cerveny D, Boucek RE, Adams AJ, Fick J, Brodin T, & JS Rehage (2024) "Differential tissue distribution of pharmaceuticals in a wild subtropical marine fish," Aquatic Toxicology https://doi.org/10.1016/j.aquatox.2024.107064
Castillo NA, Santos RO, James WR, Rezek RJ, Cervany D, Boucek RE, Fick J, Brodin T, & JS Rehage (2024) "Widespread pharmaceutical exposure at concentrations of concern for a subtropical coastal fishery: Bonefish (Albula vulpes)," Marine Pollution Bulletin https://doi.org/10.1016/j.marpolbul.2024.117143
Cesar A. Rojas, Paulo Padrão, Jose Fuentes, Gregory M. Reis, Arif R. Albayrak, Batuhan Osmanoglu, Leonardo Bobadilla (2024) "Combining multi-satellite remote and in-situ sensing for unmanned underwater vehicle state estimation," Ocean Engineering. Volume 310, Part 2, 118708, ISSN 0029-8018. https://doi.org/10.1016/j.oceaneng.2024.118708
Collins, S. B., & Bracken‐Grissom, H. D. (2024). The language of light: a review of bioluminescence in deep‐sea decapod shrimps. Biological Reviews. https://doi.org/10.1111/brv.13093
Dargie, W., Padrao, P., Bobadilla, L., & Poellabauer, C. (2024). Link Quality Fluctuation in Wireless Networks Deployed on the Surface of Different Water Bodies. IEEE Sensors Journal. Published on October 9, 2024, IEEE.
Dias Cappelini LT, Ogunbiyi OD, Guimarães Ferreira V, Monem M, Cuchimaque Lugo C, Perez MB, Gardinali P, George F, Bagner DM, Quinete N. "Assessing Variability in Children’s Exposure to Contaminants in Food: A Longitudinal Non-Targeted Analysis Study in Miami, Florida," Journal of Xenobiotics. 2024; 15(1):11. https://doi.org/10.3390/jox15010011
Dias Cappelini LT, Ogunbiyi OD, Guimarães Ferreira V, Monem M, Cuchimaque Lugo C, Perez MB, Gardinali P, George F, Bagner DM, Quinete N. "Monitoring Emerging Contaminants in Soil and Household Dust Samples by Non-Targeted Analysis in the Greater Miami area, Florida," Journal of AOAC INTERNATIONAL. Submitted _ ID AOAC-24-0329.
Eggenberger C, Viadero N, Santos R, Price R, Papastamatiou Y, Strazisar T, Madden C, Rehage J. "Seascape heterogeneity drives movement strategy selection in estuarine predators," Nov 2024. Animal Ecology (Submitted).
Erick Perera, Javier Román-Padilla, Juan A. Hidalgo-Pérez, Rubén Huesa-Cerdán,Manuel Yúfera, Juan M. Mancera, Juan A. Martos-Sitcha, Gonzalo Martinez-Rodriguez, Juan B. Ortiz-Delgado, Carmen Navarro-Guillén and Javier A. Rodriguez-Casariego (2024). Tissue explants as tools for studying the epigenetic modulation of the GH-IGF-I axis in farmed fish. Frontiers in Physiology, 15, 1410660. https://doi.org/10.3389/fphys.2024.1410660
Fernandez-Rojas, M; Fuller, CN; Valadares Tose, L; Willetts, M; Park, MA; Bhanu, NV; Garcia, BA; Fernandez-Lima, F. "Histone Modification Screening using Liquid Chromatography, Trapped Ion Mobility Spectrometry, and Time-Of-Flight Mass Spectrometry," Journal of Visualized Experiments Jan 2024 (203), e65589. https://pubmed.ncbi.nlm.nih.gov/38284546/
Fuentes J., Padrao, P., Newaz, A., & Bobadilla, L. (2024). Learning-based Adaptive Navigation for Scalar Field Mapping and Feature Tracking. Submitted to IEEE International Conference on Robotics and Automation (ICRA).
Fuller, CN; Mansoor, S; Jeanne Dit Fouque, K; Valadares Tose, L; Rodriguez-Casariego, J; Kosmopoulou, M; Suckau, D; Vitorino, FNL; Garcia, BA; Eirin-Lopez, JM; Fernandez-Lima, F. "Direct histone proteoform profiling of the unannotated, endangered coral Acropora cervicornis," Nature Communications (Submitted).
Fuller, CN; Jeanne Dit Fouque, K; Valadares Tose, L; Vitorino, FNL; Garcia, BA; Fernandez-Lima, F. Online, "Bottom-up Characterization of Histone H4 4-17 Isomers," Analytical Chemistry Oct 2024 96 (43), 17165-17173. https://pubs.acs.org/doi/10.1021/acs.analchem.4c02549
Fuller, CN; Valadares Tose, L; Vitorino, FNL; Bhanu, NV; Panczyk, EM; Park, MA; Garcia, BA; Fernandez-Lima, F. "Bottom-up Histone Post-Translational Modification Analysis Using Liquid Chromatography, Trapped Ion Mobility Spectrometry, and Tandem Mass Spectrometry," Journal of Proteome Research Aug 2024 23 (9), 3867-3876. https://pubs.acs.org/doi/full/10.1021/acs.jproteome.4c00177
Guerra de Navarro, Reyna, and Natalia Quinete. It's raining PFAS in South Florida: Occurrence of per- and polyfluoroalkyl substances (PFAS) in wet atmospheric deposition from Miami-Dade, South Florida. Atmospheric Pollution Research. 15, 12, 2024, 102302. https://doi.org/10.1016/j.apr.2024.102302.
Hatt, D. C., Nauer, F., Collado-Vides, L., and Campbell, J.E. "Physiological responses of pelagic Sargassum (Phaeophyceae) vary across species and morphotypes," Applied Phycology (In Review).
Hatt, D. C., Iporac, L.A.I, Bally, N. K., Olszak, S., Campbell, J.E., and Collado-Vides, L. (2024) "Comprehensive analysis of biomass, nutrient, and heavy metal contributions of pelagic Sargassum species (Phaeophyceae) inundations in South Florida," Phycology, 4.2: 235-255. https://doi.org/10.3390/phycology4020013
Heath, Courtney, "Prioritization of Emerging Pollutants Used for Fingerprinting for Specific Water Sources," Emerging Pollutants, UNESCO: Singer, in review
Heather Stewart, Savanna Hearne, Casey Craig, Ryan P. Moyer, Erin McDevitt, Julie Mitchell, Loraé Simpson, Marbelys Garriga, Kara Radabaugh. 2024. Using mangrove monitoring to inform and guide restoration efforts.
Helgoe, J., Davy, S. K., Weis, V. M., & Rodriguez‐Lanetty, M. (2024) "Triggers, cascades, and endpoints: connecting the dots of coral bleaching mechanisms," Biological Reviews, 99(3), 715-752. DOI: 10.1111/brv.13042
James, W.R., Castillo, N.A., Distrubell, A., Trabelsi, S., Santos, R.O., Cerveny, D., Rezek, R.J., Boucek, R.E., Adams, A.J., Fick, J., Brodin, T., Rehage, J. S. "Occurrence of pharmaceuticals in muscle tissue of a common fishery species across subtropical estuaries: comparison to blood plasma and implications for human exposure," Science of the Total Environment (Submitted).
James WR, Furman BT, Rodemann JR, Costa SV, Fratto ZW, Nelson JA, Rehage JS, & RO Santos (2024) "Widespread habitat loss leads to ecosystem-scale decrease in trophic function," Global Change Biology. https://doi.org/10.1111/gcb.17263
Jill Ashey, Javier A. Rodriguez-Casariego, Kathleen M. Durkin, Zachary Bengtsson, Samuel J. White, Ariana S. Huffmyer, Danielle M. Becker, Jose M. Eirin-Lopez, Hollie M. Putnam, Steven B. Roberts (2025) Non-coding RNA repertoire in Reef Building Corals.
Jobson, J., Tsegay, P.S., Tabares-Beltran, M., Taher, E.A., Rein, S.R., Liu, Y., Rein, K.S. "Brevetoxin induces a shift in the redox state of the proteome and unfolded protein response in human lymphoblast cells that can be alleviated with the acrolein scavenger MESNA," Environ. Toxicol. Pharmacol. https://doi.org/10.1016/j.etap.2023.104137
Jones BLH, Santos RO, James WR, Costa SV, Adams AJ, Boucek RE, Coals LRM, Cullen-Unsworth LC, Shephard S, & JS Rehage (2024) "Lack of evolution in fisheries-associated Indigenous and local knowledge research reveals opportunities for growth," Fish and Fisheries https://doi.org/10.1111/faf.12831
Joshua Helgoe. "Another microplastic threat to marine ecosystems: High dimethyl phthalate concentrations are detrimental to cnidarian health," Marine Pollution Bulletin (Submitted).
Joshua Omaojo Ocheje, Maria Mendoza Manzano, Zariah Nasir, Yelena Katsenovich, Berrin Tansel, Shyam Sivaprasad, Natalia Quinete (2024) "Analytical protocol for detection and prioritization of per- and polyfluoroalkyl substances (PFAS) in biosolid leachates," Journal of Water Process Engineering, Volume 68, 106546, ISSN 2214-7144. https://doi.org/10.1016/j.jwpe.2024.106546.
Kahmann G, Rehage JS, Massie JA, Nelson JA, Santos RO, Viadero NM, James WR, Boucek RE, Crane DP, & RJ Rezek (2024) "Trophic niche of a nonnative invader and environmental drivers of its increasing populations in the coastal Everglades," Biological Invasions. https://doi.org/10.1007/s10530-024-03444-w
Kiszka, Jeremy J.; Maricato, Guilherme; Caputo, Michelle. "Habitat suitability, occurrence, and behavior of dwarf sperm whales (Kogia sima) off St. Vincent and the Grenadines, Eastern Caribbean," Advances in marine biology, 99, 1-19. http://dx.doi.org/10.1016/bs.amb.2024.09.002
Kristine Zikmanis, Patrick O’Donnell, Simon Dedman, Michael R. Heithaus. "Legacies of ecosystem modification: factors effecting long-term variation in the abundance of juvenile bull sharks in a subtropical estuary," Estuaries and Coasts (Under Review).
Mock, AJ, T Virzi, TA Reed, SE Rothenberg, I Rodríguez-Jorquera, JC Trexler, P Frederick. "Mercury exposure in an endangered songbird: influence of marsh hydrology and evidence for early breeding impairment," Ecotoxicology (Accepted).
Mock, A.J. and T. Virzi. Cape Sable Seaside Sparrow (Ammospiza maritima mirabilis) breast feather total mercury concentrations from the Florida Everglades, Florida, USA: breeding seasons 2016 - 2018 ver 1. Environmental Data Initiative. https://doi.org/10.6073/pasta/02b67b374c052132c0f80a3934d7b1a6
Newaz, A. A. R., Padrao, P., Fuentes, J., Alam, T., Govindarajan, G., & Bobadilla, L. (2024) "LCD-RIG: Limited Communication Decentralized Robotic Information Gathering Systems," IEEE Robotics and Automation Letters, IEEE. Published on September 25, 2024.
Newaz, A., Raxit, S., Padrao, P., Fuentes J., Alam, T., & Bobadilla, L. (2024) "DyConRIG: Dynamic Consensus for Robotic Information Gathering," Submitted to IEEE International Conference on Robotics and Automation (ICRA) (submitted).
Ng, B; Ceccopieri, M.; Troxell, K.; Quinete, N.; Gardinali, P. "A versatile polydimethylsiloxane (PDMS) composite sponge for the removal of organic contaminants from waters," Chemosphere (Submitted).
Ogunbiyi, O., Dias Cappelini, LT., Monem, M., Mejias, E., George, F., Gardinali, P., Bagner, D., Quinete, N S. "Innovative Non-Targeted Screening Approach Using High-Resolution Mass Spectrometry for Identification of Specific Tracers of Soil and Dust Exposure in Children," Available at SSRN 4688884.
Ogunbiyi OD, Dias Cappelini LT, Monem M, Perez M, George F, Gardinali P, Bagner D, Quinete N. "Longitudinal assessment of Organic Chemicals and Prioritization of Chemical Tracers in Drinking water from Miami, South Florida by Non-Targeted Analysis: Source apportionment, Spatiotemporal distribution, and Socioeconomic Implications," Environmental Science & Technology. Submitted _ ID es-2024-13110z.
Oladoye, P.O., Liu, G., Zhang, Q., Cai, Y., "Reduction and amalgamation of mercury in silver nanoparticle suspensions under dark conditions," Chemosphere 371, 144035. https://doi.org/10.1016/j.chemosphere.2024.144035
Oladoye, P.O., Wang, K., Aguilar, K., Liu, G., Cai, Y., "Particles-involved photochemical processes: A review for the case of mercury reduction in relation to aquatic mercury cycling," Science of the Total Environment, 931, 172845. https://doi.org/10.1016/j.scitotenv.2024.172845
Pablo R. B. Oliveira, Dennys Leyva, Lilian V. Tose, Chad Weisbrod, Anton N. Kozhinov, Konstantin O. Nagornov, Yury O. Tsybin, and Francisco Fernandez-Lima, "Revisiting Dissolved Organic Matter Analysis Using High-Resolution Trapped Ion Mobility and FT-ICR Mass Spectrometry," Journal of the American Society for Mass Spectrometry 2024 35 (10), 2400-2407. https://pubs.acs.org/doi/10.1021/jasms.4c00232
Padrao, P., Fuentes, J., Kaarlela, T., Bayuelo, A., & Bobadilla, L. (2024) "Towards optimal human-robot interface design applied to underwater robotics teleoperation," In 2024 IEEE 20th International Conference on Automation Science and Engineering (CASE) (pp. 2368-2375). IEEE. Published on August 28, 2024.
Pezeshk, S., & Vassigh, S. "Symbiotic Shoreline Infrastructure for Biodiversity and Climate Resilience," In Proceedings of the 6th International Conference on Computational Design and Robotic Fabrication (CDRF 2024). Springer.
Paduani, M., Ross, M. & Odom, G. "Mangrove Forests of Biscayne Bay, FL, USA may Act as Sinks for Plastic Debris," Wetlands 44, 32 (2024). https://doi.org/10.1007/s13157-024-01785-9
Puthumanaillam, G., Padrao, P., Fuentes, J., Bobadilla, L., & Ornik, M. (2024) "Enhancing Robot Navigation Policies with Task-Specific Uncertainty Management," arXiv preprint arXiv:2410.15178. Published on October 19, 2024.
Raoult V, Phillips AA, Nelson JA, Niella Y, Skinner C, Tilcock MB, Burke PJ, Szpak P, James WR, & C Harrod (2024) "Why aquatic scientists should use sulfur stable isotope ratios (δ34S) more often," Chemosphere. https://doi.org/10.1016/j.chemosphere.2024.141816
Rehage, J. S., Castillo, N.A., Distrubell, A., Trabelsi, S., Santos, R.O., James, W.R., Rezek, R.J., Cerveny, D., Boucek, R.E., Adams, A.J., Fick, J., Brodin, T. "A multi-estuary assessment of pharmaceutical exposure and risk of pharmacological effects in a recreational fishery," Environmental Pollution (In Review).
Robert Tomasetti, Ligia Collado-Vides, Alain L. Duran, Heather D. Bracken-Grissom. "Mapping global seaweed species abundance, endemism, and temperature correlations: Novel insights and methodologies," Journal of Biogeography (In Revision).
Rodemann, J. R., James, W. R., Rehage, J. S., Baktoft, H., Costa, S. V., Ellis, R. D., ... & Santos, R. O. "Residency and fine-scale habitat use of juvenile goliath grouper (Epinephelus itajara) in a mangrove nursery," Bulletin of Marine Science, 99(2), 111-118.
Rodriguez-Casariego, J.A., Mercado-Molina, A., Lemos, L.S. et al. "Multi-omic characterization of mechanisms contributing to rapid phenotypic plasticity in the coral Acropora cervicornis under divergent environments," Coral Reefs 43, 53–66 (2024). https://doi.org/10.1007/s00338-023-02446-9
Ross, M. S., Stoffella, S. L., Ruiz, P. L., Subedi, S. C., Meeder, J. F., Sah, J. P., Vidales, R., Minchin, P. R., Scinto, L. J., & Zhang, K. (2024) "Transient vegetation dynamics in a tropical coastal wetland: Sea‐level rise, glycophyte retreat, and incipient loss in plant diversity," Journal of Vegetation Science, 35(3). https://doi.org/10.1111/jvs.13267
Santos R, James W, Rehage J, Eggenberger C, Lesser J, Madden C. "Trophic niche dynamics of two fish mesoconsumers in adjacent coastal habitats with varying nutrient regimes," Oecologia (Submitted).
Sturges, J. W., James, W. R., Rezek, R. J., Santos, R. O., White, M., Badlowski, G. A., Trabelsi, S., Massie, J., Nelson, J., Trexler, J. C., & Rehage, J. S. "Food web reliance on green and brown energy channels varies across an ecosystem gradient," Ecosphere (Pending).
Sturges JW, James WR, Rezek RJ, Santos RO, White M, Badlowski GA, Trabelsi S, Massie J, Nelson J, Trexler JC, and Rehage, JS. "Seasonality drives green and brown energy pathways in food webs across an ecosystem gradient," Ecosystems (Submitted).
Troxell, K.; Schonhoff, B.; Kershaw, M.; Ceccopieri, M.; Crowl, T.; Gardinali, P. "Near real-time monitoring of the Biscayne Bay Watershed (South Florida, USA) and major tributaries by water quality research buoys," Science of The Total Environment, v. 955, 177203, 2024. https://doi.org/10.1016/j.scitotenv.2024.177203
Viadero N, Massie J, Eggenberger C, James W, Boucek R, Rezek R, Santos R, Rehage J. "Between a dry marsh and a salty place: estuarine habitat suitability for a freshwater fish (Florida bass) and implications for ecosystem restoration and climate change," Estuaries and Coasts (Submitted).
Yaamini Venkataraman, Ariana Huffmyer, Samuel White, Alan Downey-Wall, Jill Ashley, Danielle Becker, Zachary Bengtsson, Hollie Putnam, Emma Strand, Javier A. Rodríguez-Casariego, Shelly Wanamaker, Katie Lottheros, Steven Roberts (2024) "DNA methylation correlates with transcriptional noise in response to elevated pCO2 in the eastern oyster (Crassostrea virginica)," Environmental Epigenetics, Volume 10, Issue 1, 2024, dvae018, https://doi.org/10.1093/eep/dvae018
Yelena Katsenovich, Berrin Tansel, Natalia Soares Quinete, Zariah Nasir, Joshua Omaojo Ocheje, Maria Mendoza Manzano (2024) "Leaching profile of per- and polyfluoroalkyl substances (PFAS) from biosolids after thickening, anaerobic digestion, and dewatering processes, and significance of protein, phosphorus, and selected ions," Science of The Total Environment. Volume 957, 177777, ISSN 0048-9697. https://doi.org/10.1016/j.scitotenv.2024.177777.
Ziegler SL, James WR, Alber M, & JE Byers "Seascape structure likely influences resource use of marsh-associated estuarine consumers over a small spatial scale," Marine Ecology Progress Series (Accepted).
- 2023 Publications
Anjuman, A., Xiang, Y., Liu, G. et al. Compositional and spectroscopic analysis of dissolved organic matter samples from Everglades periphyton and water. Environ Sci Pollut Res 30, 106502–106513 (2023). https://doi.org/10.1007/s11356-023-29461-1
Annunziato, M.; Bashirova, N.; Eeza, M.N.H.; Lawson, A.; Benetti, D.; Stieglitz, J.D.; Matysik, J.; Alia, A.; Berry, J.P. High-Resolution Magic Angle Spinning (HRMAS) NMR Identifies Oxidative Stress and Impairment of Energy Metabolism by Zearalenone in Embryonic Stages of Zebrafish (Danio rerio), Olive Flounder (Paralichthys olivaceus) and Yellowtail Snapper (Ocyurus chrysurus). Toxins 2023, 15, 397. https://doi.org/10.3390/toxins15060397
Binder BM, Rieucau G, Locascio JV, Taylor JC, Boswell KM. 2023. Active acoustic surveys reveal coastal fish community resistance to an environmental perturbation in South Florida. PeerJ 11:e14888 https://doi.org/10.7717/peerj.14888
Bradbury, M. (2023). Site prioritization and the reproduction of inequity in the restoration of Biscayne Bay. The Canadian Geographer, 67(1), 92–105. https://doi.org/10.1111/cag.12817
Campbell, L. J., Castillo, N.A., Dunn, C. D., Bose, S. M., Perez, A., Schmitter-Soto, J. J., Mejri, S. C., Boucek, R. E., Santos, R. O., Adams, A. J., Rehage, J. S., Goldberg, T. L. (2023). Gill microbiomes accurately predict the geographic origin of bonefish (Albula vulpes) when combined with machine learning models. Environ Biol Fish. https://doi.org/10.1007/s10641-023-01462-6
Campbell, L.J., Castillo, N.A., Shenker, J., Owens, L.A., Santos, R.O., Adams, A.J., Rehage, J.S., Denton, K.E., Goldberg, T.L. (2022). Bone appetite: DNA metabarcoding as a non-lethal alternative to morphological dietary assessment in Atlantic bonefish (Albula vulpes). Environ Biol Fish. https://doi.org/10.1007/s10641-022-01328-3
Castillo, N.A., James, W.R., Santos, R.O., Rezek, R., Cerveny, D., Boucek, R.E., Adams, A.J., Fick, J., Brodin, T., Rehage, J.S. (2023). Understanding pharmaceutical exposure and the potential for effects in marine biota: a survey of bonefish (Albula vulpes) across the Caribbean Basin. Chemosphere, 349(3):140949. https://doi.org/ 10.1016/j.chemosphere.2023.140949
Dennys Leyva, Muhammad Usman Tariq, Rudolf Jaffé, Fahad Saeed, and Francisco Fernandez-Lima. Environmental Science & Technology 2023 57 (6), 2672-2681. DOI: 10.1021/acs.est.2c04715 "
Flood PJ, Loftus WF, Trexler JC (2023) Fishes in a seasonally pulsed wetland show spatiotemporal shifts in diet and trophic niche but not shifts in trophic position. Food Webs 34:e00265. https://doi.org/10.1016/j.fooweb.2022.e00265
Gervasi, C. L., Karnauskas, M., Rios, A., Santos, R. O., James, W. R., Rezek, R. J., & Rehage, J. S. (2023). Rapid approach for assessing an unregulated fishery using a series of data-limited tools. Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science, 15, e10270. https://doi.org/10.1002/mcf2.10270
Hackerott, S., F. Virdis, P. J. Flood, D. G. Souto, W. Paez, J. M. Eirin-Lopez. (2023) Phenotypic plasticity is associated with epigenetic variation in two Caribbean Acropora corals. Molecular Ecology 32(17): 4814-4828
Heather Stewart, Savanna Hearne, Casey Craig, Ryan P. Moyer, Erin McDevitt, Julie Mitchell, Loraé Simpson, Marbelys Garriga, Kara Radabaugh. 2023. Using mangrove monitoring to inform and guide restoration efforts.
Ikechukwu S. Onwuka, Leonard J. Scinto, René M. Price, Assefa M. Melesse, Dynamics of particles and phosphorus in canals of the Lower Everglades, Florida, USA, Science of The Total Environment, Volume 902, 2023, 166508, ISSN 0048-9697, https://doi.org/10.1016/j.scitotenv.2023.166508.
Jazmin Locke-Rodriguez, Tiffany Troxler, Michael C. Sukop, Leonard Scinto, Krish Jayachandran. Floating flowers: Screening cut-flower species for production and phytoremediation on floating treatment wetlands in South Florida, Environmental Advances, Volume 13, 2023, 100405, ISSN 2666-7657, https://doi.org/10.1016/j.envadv.2023.100405.
Li X, Cui D, Ng B, Ogunbiyi OD, Guerra de Navarro M, Gardinali P, et al. Non-targeted analysis for the screening and semi-quantitative estimates of per-and polyfluoroalkyl substances in water samples from South Florida environments. J Hazard Mater 2023;452. https://doi.org/10.1016/j.jhazmat.2023.131224.
Locke-Rodriguez, J., Troxler, T., Sukop, M., Scinto, L., and Jayachandran, K. 2023. Floating flowers: Screening cut-flower species for production and phytoremediation on floating treatment wetlands in South Florida. Environmental Advances, 13, 100405. ISSN 2666-7657
Alsayegh, J. Fuentes, L. Bobadilla, and D. Shell, “Oblivious Markov Decision Processes: Planning and Policy Execution.” Accessed: Dec. 18, 2023. [Online]. Available: https://cse-robotics.engr.tamu.edu/dshell/papers/cdc23mdp.pdf
Miguel Santos-Fernandez, Kevin Jeanne Dit Fouque, and Francisco Fernandez-Lima. Integration of Trapped Ion Mobility Spectrometry and Ultraviolet Photodissociation in a Quadrupolar Ion Trap Mass Spectrometer. Analytical Chemistry 2023 95 (22), 8417-8422. DOI: 10.1021/acs.analchem.3c01220
Miller, S. A., Jeanne Dit Fouque, K., Hard, E. R., Balana, A. T., Kaplan, D., Voinov, V. G., Ridgeway, M. E., Park, M. A., Anderson, G. A., Pratt, M. R., & Fernandez-Lima, F. (2023). Top/Middle-Down Characterization of α‑Synuclein Glycoforms. Analytical Chemistry (Washington), 95(49), 18039–18045. https://doi.org/10.1021/acs.analchem.3c02405
N.A. Castillo, W.R. James, R.O. Santos, R. Rezek, D. Cerveny, R.E. Boucek, A.J. Adams, T. Goldberg, L. Campbell, A.U. Perez, J.J. Schmitter-Soto, J.P. Lewis, J. Fick, T. Brodin, J.S. Rehage (2023). Understanding pharmaceutical exposure and the potential for effects in marine biota: A survey of bonefish (Albula vulpes) across the Caribbean Basin. Chemosphere, 140949, ISSN 0045-6535, https://doi.org/10.1016/j.chemosphere.2023.140949.
Ogunbiyi, O. D., Ajiboye, T. O., Omotola, E. O., Oladoye, P. O., Olanrewaju, C. A., & Quinete, N. (2023). Analytical approaches for screening of per-and poly fluoroalkyl substances in food items: A review of recent advances and improvements. Environmental Pollution, 121705.
Ogunbiyi, Olutobi, Massenat, Neumiah and Quinete, Natalia Soares. 2023. Dispersion and Stratification of Per-And Polyfluoroalkyl Substances (Pfas) in Surface and Deep-Water Profiles: A Case Study of the Biscayne Bay Area. Available at SSRN. http://dx.doi.org/10.2139/ssrn.4572299
Perez, C.M., Gong, Z., Yoo, C. et al. Inhibitor of DNA Binding Protein 3 (ID3) and Nuclear Respiratory Factor 1 (NRF1) Mediated Transcriptional Gene Signatures are Associated with the Severity of Cerebral Amyloid Angiopathy. Mol Neurobiol (2023). https://doi.org/10.1007/s12035-023-03541-2
Perez., C., M., Felty, Q., Yoo, C. et al. Inhibitor of DNA Binding Protein 3 (ID3) and Nuclear Respiratory Factor 1 (NRF1) Mediated Transcriptional Gene Signatures are Associated with the Severity of Cerebral Amyloid Angiopathy. Molecular Neurobiology. September 5th, 2023.
Rodemann, J.R., James, W.R., Rehage, J.S., Baktoft, H., Costa, S.V., Ellis, R.D., Gonzalez, L., Corujo, R.S. Residency and fine-scale habitat use of juvenile Goliath Grouper (Epinephelus itajara) in a mangrove nursery. Bulletin of Marine Science, Volume 99, Number 2, 2023, pp. 111-118(8). DOI: https://doi.org/10.5343/bms.2022.0061
Rodemann, J.R., James, W.R., Rehage, J.S., Baktoft, H., Costa, S.V., Ellis, R.D., Gonzalez, L., Santos, R.O., (2023) “Residency and fine-scale habitat use of juvenile goliath grouper (Epinephelus itajara) in a mangrove nursery.” Bulletin of Marine Science. https://doi.org/10.5343/bms.2022.0061
Rojas, C. A.; Devesa, A.; Cabrera, H.; Reis, G. M.; Bobadilla, L.; Smith, R. N. (2023). Privacy-Preserving Multi-Agent Marine Data Collection via Differential Privacy. IEEE Oceans 2023 Gulf Coast Conference Online Proceedings.
Rojas, C. A.; Padrao, P.V.; Fuentes, J.E.; Reis, G. M.; Albayrak, A. R.; Osmanoglu, B.; Bobadilla, L. (2023). Combining Multi-Satellite Remote and In-situ Sensing for Autonomous Underwater Vehicle Localization and Navigation. Available at SSRN 4521499
Stormie B Collins, Heather D Bracken-Grissom, J Antonio Baeza, The complete mitochondrial genome of the pink shrimp Farfantepenaeus duorarum (Burkenroad, 1939) (Decapoda: Dendrobranchiata: Penaeidae), Journal of Crustacean Biology, Volume 42, Issue 1, March 2022, ruac007, https://doi.org/10.1093/jcbiol/ruac007
Sturges et al., 2023 (in-revision) Seasonality drives green and brown energy pathways in food webs across an ecosystem gradient
Timm, L, Tucker N, Rix A, LaBua S, Andrés Lopez J, Boswell K, Glass J. 2023. The untapped potential of seascape genomics in the North Pacific. Frontiers in Conservation Science. https://doi.org/10.3389/fcosc.2023.1249551.
Troxell, Kassidy & Ceccopieri, Milena & Gardinali, Piero. (2023). Unraveling the chemical fingerprint of the Miami River sources: Insights from high-resolution mass spectrometry and nontarget analysis. Chemosphere. 349. 140863. 10.1016/j.chemosphere.2023.140863.
Varela, C., Iporac, L.A., Senna, A., 2023. A new species of Quadrimaera Krapp-Schickel & Ruffo, 2000 (Amphipoda: Senticaudata: Maeridae) from the east coast of Florida, USA. Novitates Caribaea 29–39. https://doi.org/10.33800/nc.vi21.325
- 2022 Publications
Annunziato, Mark, et al. (2022) “An Integrated Systems-Level Model of the Toxicity of Brevetoxin Based on High-Resolution Magic-Angle Spinning Nuclear Magnetic Resonance (HRMAS NMR) Metabolic Profiling of Zebrafish Embryos.” The Science of the Total Environment, vol. 803, Elsevier B.V, pp. 149858–149858, https://doi.org/10.1016/j.scitotenv.2021.149858.
Beal A. P., S. Hackerott, K. Feldheim, S. Gruber, J. M. Eirin-Lopez (2022). Age group DNA methylation differences in lemon sharks (Negaprion brevirostris): Implications for future age estimation tools. Ecology and Evolution 12: e9226
Boucek, R.E., Rehage, J., Castillo, N.A., Dowskin, E., Larkin, M., Santos, R., Navarre, C., Adams, A. (2022 in review). Using recreational tournament data to construct a 52 year timeseries of the Florida Keys recreational Bonefish fishery – In Review
Bradbury, M. (2022). Site prioritization and the reproduction of inequity in the restoration of Biscayne Bay. The Canadian Geographer/Le Géographe canadien. https://doi.org/10.1111/cag.12817
Campbell, L.J., Castillo, N.A., Dunn, C.D., Perez, A., Schmitter-Soto, J.J., Mejri, S., Boucek, R. E., Santos Corujo, R., Adams, A.J., Rehage, J.S., Goldberg, T. L. (2022 in review). Viruses of Atlantic Bonefish (Albula vulpes) show geographic patterns consistent with population declines. – In Review.
Campbell, L.J., Castillo, N.A., Shenker, J., Owens, L.A., Santos, R.O., Adams, A.J., Rehage, J.S., Denton, K.E., Goldberg, T.L. (2022). Bone appetit: DNA metabarcoding as a non-lethal alternative to morphological dietary assessment in Atlantic bonefish (Albula vulpes). Environmental Biology of Fishes.
Collins, S. B., Bracken-Grissom, H. D., & Baeza, J. A. (2022). The complete mitochondrial genome of the pink shrimp Farfantepenaeus duorarum (Burkenroad, 1939) (Decapoda: Dendrobranchiata: Penaeidae). Journal of Crustacean Biology, 42 (1), ruac007.
Cui, D., Abdullah, A. M., Peller, J. R., Mezyk, S. P., Mebel, A., & O’Shea, K. (2022). Effectiveness of Photocatalysis, Radiolysis, and Ultrasonic Irradiation in the Remediation of GenX: Computational Study of the Ultrasonically Induced Mineralization. Journal of Environmental Engineering, 148 (11). https://doi.org/10.1061/(asce)ee.1943-7870.0002066
Esmaeilian A., and O'Shea K., (2022) “Application of dimensional analysis in sorption modeling of the styryl pyridinium cationic dyes on reusable iron based humic acid coated magnetic nanoparticles” Chemosphere 286:131699.
Esmaeilian A., Dionysiou D., and O'Shea K., (2022) “Incorporating the simultaneous effect of initial concentration and sorbent dose into removal prediction model using glyphosate experimental data and theoretical analysis” Chemical Engineering Journal.
Gervasi CL, Nelson JA, Swart PK, Santos RO, Rezek RJ, James WR, Jefferson AE, Drymon JM, Carroll J, Boucek RE, & JS Rehage (2022) Otolith stable isotope micro-sampling to discriminate poorly studied stocks: Crevalle Jack in the eastern Gulf of Mexico. Estuarine, Coastal and Shelf Science. https://doi.org/10.1016/j.ecss.2022.108130
Gervasi, C. L., Massie, J. A., Rodemann, J.R., Trabelsi, S., Santos, R. O., & Rehage, J. S. (2022). Recreational Angler Contributions to Fisheries Management Are Varied and Valuable: Case Studies from South Florida. Fisheries, 47 (11), 469-477.
Iporac, L.A.R., Hatt, D., Bally, N.K., Castro, A., Cardet, E., Mesidor, R., Olszak, S., Duran, A., Burkholder, D., and Collado-Vides, L. (2022). Community-based monitoring reveals spatiotemporal variation of sargasso inundation levels and morphotype dominance across the Caribbean and South Florida. Aquatic Botany.
James WR, Bautista V, Rezek RJ, Zink IC, Rehage JS, & RO Santos (2022) A review of the potential impacts of commercial inshore pink shrimp fisheries on recreational flats fisheries in Biscayne Bay, FL, USA. Environmental Biology of Fishes. https://doi.org/10.1007/s10641-022-01319-4
James WR, Santos RO, Rodemann JR, Rezek RJ, Fratto ZW, Furman BT, Hall MO, Kelble CR, Rehage JS, & JA Nelson (in revision) Widespread seagrass die-off has no legacy effect on basal resource use of seagrass food webs in Florida Bay, USA.
Jeanne Dit Fouque, Kevin, Samuel A. Miller, Khoa Pham, Natarajan V. Bhanu, Yarixa L. Cintron-Diaz, Dennys Leyva, Desmond Kaplan, et al. (2022) Top-‘Double-Down’ Mass Spectrometry of Histone H4 Proteoforms: Tandem Ultraviolet-Photon and Mobility/Mass-Selected Electron Capture Dissociations. Analytical chemistry 94, 44: 15377–15385.
Lemos, L.S., Gantiva, L., Kaylor, C., Sanchez, A., Quinete, N. (2022) "American Oysters as Bioindicators of Emerging Organic Contaminants in Florida, United States." Science of the Total Environment, 835 (6), 155316. dx.doi.org/10.2139/ssrn.4048906
Leyva, D.; Jaffé, R.; Courson, J.; Kominoski, J.; Tariq, U.; Saeed, F.; and Fernandez-Lima, F. (2022). Molecular level characterization of DOM along a freshwater-to-estuarine coastal gradient in the Florida Everglades. Aquat. Sci., 84, 63.
Leyva, D., Tariq U., Saeed, F., Jaffé, R.; Fernandez-Lima, F. (2022) “Unsupervised Structural Classification of Dissolved Organic Matter Based on Fragmentation Pathways.” Environ. Sci. Technol., 56 (2), 1458-1468.
Li, X., Fatowe, M., Cui, D., & Quinete, N. (2022). Assessment of per- and polyfluoroalkyl substances in Biscayne Bay surface waters and tap waters from South Florida. Science of the Total Environment, 806, 150393. https://doi.org/10.1016/j.scitotenv.2021.150393
Massie JA, Santos, RO, Rezek, RJ, James, WR, Viadero, NM, Boucek, RE, Blewett DA, Trotter AA, Stevens PW, & JS Rehage (2022). Primed and cued: long-term acoustic telemetry links interannual and seasonal variations in freshwater flows to the spawning migrations of Common Snook in the Florida Everglades. Movement Ecology. https://doi.org/10.1186/s40462-022-00350-5
Miller, Samuel A., Kevin Jeanne Dit Fouque, Mark E. Ridgeway, Melvin A. Park, and Francisco Fernandez-Lima (2022). Trapped Ion Mobility Spectrometry, Ultraviolet Photodissociation, and Time-of-Flight Mass Spectrometry for Gas-Phase Peptide Isobars/Isomers/Conformers Discrimination. Journal of the American Society for Mass Spectrometry 33, 7: 1267–1275.
B. Ng, N. Quinete, P. Gardinali. Differential organic contaminant ionization source detection and identification in environmental waters by non-targeted analysis. Environ. Toxicol. Chem. 2022. In Press. doi.org/10.1002/etc.5268.
Padrao, P., Dominguez, A., Bobadilla, L. and Smith, R. (2022.). Towards Learning Ocean Models for Long-term Navigation in Dynamic Environments. In: OCEANS 2022-Chennai. IEEE
Padrao, P., Fuentes, J., Bobadilla, L. and Smith, R.N. (2022). Estimating spatio-temporal fields through reinforcement learning. Frontiers in Robotics and AI, 9. doi:10.3389/frobt.2022.878246.
Perez C, Felty Q. Molecular basis of the association between transcription regulators nuclear respiratory factor 1 and inhibitor of DNA binding protein 3 and the development of microvascular lesions. Microvascular Research. 2022 Feb: 104337. DOI: 10.1016/j.mvr.2022.104337. PMID: 35143811.
Perez, C., Felty, Q., Yoo, C.W., Roy, D., Deoraj, A. (2022). Molecular Contributions of NRF1 and ID3 to Vascular Toxicity in Cerebral Amyloid Angiopathy. Society of Toxicology 61st Annual Meeting. Toxicological Sciences: The Toxicologist. San Diego, California.
Pezeshk, S. (2022) Bio-Tile: An Intelligent Hybrid-Infrastructure. In: Yuan P.F., Chai H., Yan C., Leach N. (eds) Proceedings of the 2021 Digital FUTURES. CDRF 2021. Springer, Singapore. https://doi.org/10.1007/978-981-16-5983-6_8
Rezek RJ, James WR, Bautista V, Zink IC, Rehage JS, & RO Santos (2022). Temporal trends of Biscayne Bay pink shrimp fisheries catch and economic indicators. Environmental Biology of Fishes. https://doi.org/10.1007/s10641-022-01314-9
Rodriguez-Casariego, Javier A., Ross Cunning, Andrew C. Baker, and Jose M. Eirin-Lopez (2022). Symbiont Shuffling Induces Differential DNA Methylation Responses to Thermal Stress in the Coral Montastraea Cavernosa. Molecular Ecology 31 (2): 588–602.
Rojas, C., Padrao, P., Fuentes, J., Albayrak, A., Osmanoglu, B. and Bobadilla, L. (2022). Combining Remote and In-situ Sensing for Autonomous Underwater Vehicle Localization and Navigation. In: OCEANS 2022, Hampton Roads. IEEE, pp.1–7.
Santos RO, James WR, Nelson JA, Rehage JS, Serafy J, Pittman SJ, & D Lirman (2022) Influence of seascape spatial pattern on the trophic niche of an omnivorous fish. Ecosphere https://doi.org/10.1002/ecs2.3944
Troxell, K., Ng, B., Ley, I. and Gardinali, P. (2022), Detecting Water Constituents Unique to Septic Tanks as a Wastewater Source in the Environment by Non-target Analysis; South Florida’s Deering Estate Rehydration Project Case Study. Environ Toxicol Chem. Accepted Author Manuscript. https://doi.org/10.1002/etc.5309
Zahilyn D. Roche Allred, Brianna L. Martinez, Abigail Green, Anthony Farias, Ana Tomlinson, Jeffrey Gonzalez, Aaron Rose, Alex Kararo, Kristin Parent, Rebecca Matz, Sonia Underwood, (2022) “Lessons Learned from the Implementation and Evaluation of Multidisciplinary Activities”, Journal of Chemical Education, under review.
- 2021 Publications
B. J. Place, E. M. Ulrich, J. K. Challis, A. Chao, B. Du, K. Favela, Y. Feng, C. M. Fisher, P. Gardinali, A. Hood, A. M. Knolhoff, A. D. McEachran, S. L. Nason, S. R. Newton, B. Ng, J. Nuñez, K. T. Peter, A. L. Phillips, N. Quinete, R. Renslow, J. R. Sobus, E. M. Sussman, B. Warth, S. Wickramasekara, A. J. Williams. An introduction to the benchmarking and publications for non-targeted analysis working group. Anal. Chem. 2021, 93 (49), 16289-16296.
Balderas-Guzman, C., Wang, R., Muellerklein, O., Smith, M.A., & Eger, C.G. (2021). Comparing stormwater quality and watershed typologies across the United States: a machine learning approach. Water Research. (In Review)
Beal, A., Hackerott, S., Franks, B., Gruber, S. H., Feldheim, K., & Eirin-Lopez, J. M. (2021) Epigenetic responses in juvenile Lemon sharks (Negaprion brevirostris) during a coastal dredging episode in Bimini, Bahamas. Ecological Indicators, 127, 107793. https://doi.org/10.1016/j.ecolind.2021.107793
Cerveny, D., Fick, J., Klaminder, J., McCallum, E.S., Bertram, M.G., Castillo, N.A., Brodin, T. (2021) “Water temperature affects the biotransformation and accumulation of a psychoactive pharmaceutical and its metabolite in aquatic organisms.” Environment International, 155, 106705. https://doi.org/10.1016/j.envint.2021.106705
Gaiser, E.E., J.S. Kominoski, D.M. McKnight, C.A. Bahlai, C. Cheng, S. Record, W. Wollheim, K.R. Christianson, M.R. Downs, P.A. Hawman, S.J. Holbrook, A. Kumar, D.R. Mishra, N.P. Molotch, R.B. Primack, A. Rassweiler, R.J. Schmitt, L. Sutter. Long-term ecological research and the COVID-19 anthropause: A window to understanding social-ecological disturbance. Ecosphere (in press)
García Barcia L, Pinzone M, Lepoint G, Pau C, Das K, Kiszka JJ. Factors affecting mercury concentrations in two oceanic cephalopods of commercial interest from the southern Caribbean. Mar Pollut Bull. 2021 Jul;168:112408. doi: 10.1016/j.marpolbul.2021.112408. Epub 2021 May 6. PMID: 33965692.
Gervasi CL, Santos RO, Rezek RJ, James WR, Boucek RE, Bradshaw C, Kavanagh C, Osborne J, & Rehage JS (2021) Bottom-up conservation: Using translational ecology to inform conservation priorities for a recreational fishery. Canadian Journal of Fisheries and Aquatic Sciences https://doi.org/10.1139/cjfas-2021-0024
Hackerott, S., H. A. Martell, J. M. Eirin-Lopez. (2021) Coral environmental memory: Causes, mechanisms, and consequences for future reefs. Trends in Ecology and Evolution 36: 1011-1023
James WR, Santos RO, Rehage JS, Doerr JC, & JA Nelson (2021) E-scape: consumer specific landscapes of energetic resources derived from stable isotope analysis and remote sensing. Journal of Animal Ecology https://doi.org/10.1111/1365-2656.13637
Juliet M. Wong and Jose M. Eirin-Lopez (2021) Evolution of methyltransferase like (METTL) proteins in Metazoa: A complex gene family involved in epitranscriptomic regulation and other epigenetic processes. Molecular Biology and Evolution msab267. https://doi.org/10.1093/molbev/msab267
Kimball ME, Connolly RM, Alford SB, Colombano DD, James WR, Kenworth MD, Norris GS, Ollerhead J, Ramsden S, Rehage JS, Sparks EL, Waltham NJ, Worthington TA, & Taylor MD (2021) Novel applications of technology for advancing tidal marsh ecology. Estuaries & Coasts doi: 10.1007/s12237-021-00939-w
Li, X., Fatowe, M., Cui, D., Quinete, N. (2021) "Assessment of per- and polyfluoroalkyl substances in Biscayne Bay surface waters and tap waters from South Florida." Science of the Total Environment, 806, 1, 150393. https://doi.org/10.1016/j.scitotenv.2021.150393
Lugo Charriez, K., Soledade Lemos, L., Carrazana, Y. et al. Application of an Improved Chloroform-Free Lipid Extraction Method to Staghorn Coral (Acropora cervicornis) Lipidomics Assessments. Bull Environ Contam Toxicol 107, 92–99 (2021). https://doi.org/10.1007/s00128-020-03078-3
Meeder, J.F., Parkinson, R.W., Ogurcak, D. et al. (2021) "Changes in Sediment Organic Carbon Accumulation under Conditions of Historical Sea-Level Rise, Southeast Saline Everglades, Florida, USA," Wetlands. https://doi.org/10.1007/s13157-021-01440-7
Moncada, A.M., Melesse, A.M., Vithanage, J., Price, R.M. (2021) "Long-Term Assessment of Surface Water Quality in a Highly Managed Estuary Basin." International Journal of Environmental Research and Public Health, 18, 9417. https://doi.org/10.3390/ijerph18179417
Brian Ng, Natalia Quinete, Stephanie Maldonado, Kathleen Lugo, Julian Purrinos, Henry Briceño, Piero Gardinali. (2021) "Understanding the occurrence and distribution of emerging pollutants and endocrine disruptors in sensitive coastal South Florida Ecosystems." Science of the Total Environment 757. https://doi.org/10.1016/j.scitotenv.2020.143720.
Olanrewaju, C. A., Ramirez, C. E., & Fernandez-Lima, F. (2021). Characterization of Deasphalted Crude Oils Using Gas Chromatography–Atmospheric Pressure Laser Ionization–Trapped Ion Mobility Spectrometry–Time-of-Flight Mass Spectrometry. Energy & Fuels, 35(17), 13722-13730.
Olanrewaju, C. A., Ramirez, C. E., & Fernandez-Lima, F. (2021). Comprehensive Screening of Polycyclic Aromatic Hydrocarbons and Similar Compounds Using GC–APLI–TIMS–TOFMS/GC–EI–MS. Analytical Chemistry, 93(15), 6080-6087.
Onwuka, I.S., Scinto, L.J., Mahdavi Mazdeh, A. (2021) "Comparative Use of Hydrologic Indicators to Determine the Effects of Flow Regimes onWater Quality in Three Channels across Southern Florida, USA." Water 2021, 13, 2184. https://doi.org/10.3390/w13162184
Peña, F., Nardi, F., Melesse, A., Obeysekera, J., Castelli, F., Price, R. M., Crowl, T., and Gonzalez-Ramirez, N.: Compound flood modelling framework for rainfall-groundwater interactions, Nat. Hazards Earth Syst. Sci. Discuss. [preprint], https://doi.org/10.5194/nhess-2021-259, in review, 2021.
Francisco Peña, Fernando Nardi, Assefa Melesse, Jayantha Obeysekera. (2021) "Assessing geomorphic floodplain models for large scale coarse resolution 2D flood modelling in data scarce regions." Geomorphology 389. https://doi.org/10.1016/j.geomorph.2021.107841.
Pittman SJ, Yates KL, Bouchet PJ,… James WR… (34 additional authors) (2021) Seascape ecology: Identifying research priorities for an emerging ocean sustainability science. Marine Ecology Progress Series https://doi.org/10.3354/meps13661
Presa-Reyes, Maria, and Shu-Ching Chen. "Weakly-Supervised Damaged Building Localization and Assessment with Noise Regularization." In 2021 IEEE 4th International Conference on Multimedia Information Processing and Retrieval (MIPR), pp. 8-14. IEEE, 2021.
Presa-Reyes, Maria, Yudong Tao, Shu-Ching Chen, and Mei-Ling Shyu. (2021) "Deep Learning with Weak Supervision for Disaster Scene Description in Low-Altitude Imagery." IEEE Transactions on Geoscience and Remote Sensing
Rodemann JR, James WR, Santos RO, Furman BT, Fratto ZW, Bautista V, Hernandez JL, Viadero NM, Linenfelser JO, Lacy LA, Hall MO, Kelble CR, Kavanaugh C, & JS Rehage (2021) Impact of extreme disturbances on suspended sediment in Western Florida Bay: Implications for seagrass resilience. Frontiers in Marine Science https://doi.org/10.3389/fmars.2021.633240
Rodriguez-Casariego J. A., R. Cunning, A. C. Baker, J. M. Eirin-Lopez (2021) Symbiont shuffling induces differential DNA methylation responses to thermal stress in the coral Montastraea cavernosa. Molecular Ecology, 00, 1-15 doi:10.1111/mec.16246
Russell Fielding, Jeremy J. Kiszka, Catherine Macdonald, Meaghan A. McCormack, Jessica Dutton, Alison D. Ollivierre, James A. Arnett, Molly Elkins, Niko A. Darby, Hannah-Marie Garcia, Suzanne Skinner, Haley Tucker & Vincent Reid (2021). "Demographic and geographic patterns of cetacean-based food product consumption and potential mercury exposure within a Caribbean whaling community." Human and Ecological Risk Assessment: An International Journal, 27:6, 1671-1695, DOI: 10.1080/10807039.2020.1870865
Smith, M. A., Kominoski, J. S., Gaiser, E. E., Price, R. M., & Troxler, T. G. (2021). Stormwater runoff and tidal flooding transform dissolved organic matter composition and increase bioavailability in urban coastal ecosystems. Journal of Geophysical Research: Biogeosciences, 126(7), e2020JG006146.
Tariq U., Leyva, D., Fernandez-Lima, F., Saeed, F. (2021) “Graph Theoretic Approach for the Analysis of Comprehensive Mass-Spectrometry (MS/MS) Data of Dissolved Organic Matter.” IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 3742-3746.
Van Dam, B., Polsenaere, P., Barreras-Apodaca, A., Lopes, C., Sanchez-Mejia, Z., Tokoro, T., et al. (2021). Global trends in air-water CO2 exchange over seagrass meadows revealed by atmospheric Eddy Covariance. Global Biogeochemical Cycles, 35, e2020GB006848. https://doi.org/10.1029/2020GB006848
Yando, E.S., T.M. Sloey, F. Dahdouh-Guebas, K. Rogers, G.M.O. Abuchahla, S. Cannicci, S.W.J. Canty, T.C. Jennerjahn, D.E. Ogurcak, J.B. Adams, R.M. Connolly, K. Diele, S.Y. Lee, J.K. Rowntree, S. Sharma, K.C. Cavanaugh, N. Cormier, I.C. Feller, S. Fratini, X. Ouyang, A.K.S. Wee, and D.A. Friess (2021). "Conceptualizing ecosystem degradation using mangrove forests as a model system." Biological Conservation 263, 109355. doi.org/10.1016/j.biocon.2021.109355
- 2020 Publications
Burton, L., K. Jayachandran, S. Bhansali, “The real-time revolution for in-situ soil nutrient sensing: A review,” Journal of the Electrochemical Society, January 2020 - Under Review
Burton, L., V. Kamat, K. Jayachandran, S. Bhansali, “SensePod for real-time evaluation of plant phenotypic characteristics,” Journal of Biosensors and Bioelectronics, January 2020 - Under Review
Castellanos, A., M. G. Hernandez, M. Tomic-Canic, I. Jozic and F. Fernandez-Lima. Multimodal, in Situ Imaging of Ex Vivo Human Skin Reveals Decrease of Cholesterol Sulfate in the Neoepithelium during Acute Wound Healing. Analytical Chemistry, 2020, 92, 1386-1394. DOI: 10.1021/acs.analchem.9b04542
Charriez KL, Carrazana Y, Lemos LS, Hauser-Davis RA, Rodríguez-Casariego J, Eirin-Lopez JM, Quinete NS. Development of an improved chloroform-free lipid extraction method applied to staghorn Acropora cervicornis corals lipid determinations. Submitted to Bulletin of Environmental Contamination and Toxicology. 28 Aug 2020.
Cui, D., Li, X., & Quinete, N. (2020). Occurrence, fate, sources and toxicity of PFAS: What we know so far in Florida and major gaps. Trends in Analytical Chemistry, 130, 115976. https://doi.org/10.1016/j.trac.2020.115976
Durán, A., Flood P., Barton, M., Mercado-Molina, A.E., Trexler, J.C. Invasion impacts on function and services of aquatic ecosystems. Hydrobiologia (Under Review)
Fielding, R., Kiszka, J., MacDonald, C., MacCornack, M.A., Dutton, J., Ollivierre, A.D., Arnett, J., Elkins, M., Darby, N.A., Garcia, H.-M., Skinner, S., Tucker, H. & Reid, V. "Demographic and geographic patterns of cetacean-based food product consumption and potential mercury exposure within a Caribbean whaling community". Human and Ecological Risk Assessment.
Garcia-Barcia, L., Pinzone, M., Lepoint, G., Pau, C., Das, K. & Kiszka, J. "Mercury concentrations in relation to trophic level and body length in two oceanic cephalopods of commercial interest from the southern Caribbean". Marine Pollution Bulletin.
Gaiser, E., Kominoski, J., McKnight, D., Bahlai, C., Cheng, C., Record, S., Wollheim, W., Christianson, K., Downs, M., Harms, T., Hawman, P., Holbrook, S., Kumar, A., Mishra, D., Molotch, N., Primack, R., Rassweiler, A., Schmitt, R., Sutter, L. "Long-term ecological research and the COVID-19 anthropause: A window to understanding social-ecological disturbance". Ecosphere. submitted.
Henderson A., Ng B., Landeweer S., Quinete N., Gardinali P."Assessment of sucralose, caffeine and acetaminophen as anthropogenic tracers in aquatic systems across Florida." B. Environ. Contam. Tox. 2020, 1-7.
Howard, J.L., Lopes, C.C., Wilson, S.S., McGee-Absten, V., Carrión, C.I., Fourqurean, J.W. Decomposition Rates of Surficial and Buried Organic Matter and the Lability of Soil Carbon Stocks Across a Large Tropical Seagrass Landscape. Estuaries and Coasts (2020). https://doi.org/10.1007/s12237-020-00817-x
Iporac LAR. 2020. Are Asians and Asian-Americans Excluded in Diversity, Equity, and Inclusion Initiatives? Limnology and Oceanography Bulletin, doi: 10.1002/lob.10408
Leyva, D., Jaffe, R., Fernandez-Lima, F., Structural Characterization of Dissolved Organic Matter at the Chemical Formula Level Using TIMS-FT-ICR MS/MS. Analytical Chemistry 2020, 92 (17), 11960-11966.
Lugo Charriez K., Lemos L.S., Carrazana Y., Rodriguez-Casariego J.A, Eirin-Lopez J.M, Hauser-Davis R.A.,Gardinali P., Soares Quinete N., (2020) "Application of an Improved Chloroform-Free Lipid Extraction Method to staghorn coral (Acropora cervicornis) Lipidomics Assessment". Bulletin of Environmental Contamination and Toxicology (submitted)
McCormack, M.A., Fielding, R., Kiszka, J., Paz, V., Jackson, B.P., Bergfelt, D.R. & Dutton, J., 2020. "Mercury and selenium concentrations, and selenium: mercury molar ratios, in small cetaceans taken off St. Vincent, West Indies". Environmental Research, 181: 108908
Meeder, J.M., R.W. Parkinson, D. E. Ogurcak, M.S. Ross, J. Kominoski, and S. Castaneda. Sediment accumulation and OC storage under conditions of Holocene sea-level rise, Southeast Saline Everglades, Florida, U.S.A. Wetlands. Submitted.
Mekonnen, Y., L. Burton, A. Sarwat, S. Bhansali, “Sensors, IoT, Smart Agriculture and Future of Smart City”, Submitted to Journal of Electrochemical Society, 2020 (Under Review)
Mekonnen, Y., S. Namduri, L. Burton, A. Sarwat, S. Bhanslai, “Machine Learning Techniques in Wireless Sensor Network based Precision Agriculture”, Journal of Electrochemical Society, 2020 (In press)
Namuduri, S., B.N. Narayanan, V.S.P. Davuluru, L. Burton, S. Bhansali, “Deep Learning Methods for Sensor based Predictive Maintenance and Future Perspectives for Electrochemical Sensors”, Journal of Electrochemical Society, 2020 (In press)
Ng, B., Quinete, N., & Gardinali, P. R. (2020). Assessing accuracy, precision and selectivity using quality controls for non-targeted analysis. Science of The Total Environment, 136568 (In press)
Ng B., Quinete N., Maldonado S., Lugo K., Purrinos J., Briceño H., Gardinali P. "Understanding the occurrence and distribution of emerging pollutants and endocrine disruptors in sensitive South Florida Ecosystems." In Press. Sci. Total Environ. 2020,
Olanrewaju C.A., Ramirez, C. E., & Fernandez-Lima, F. (2020) "Comprehensive Screening of Polycyclic Aromatic Hydrocarbons and similar compounds using GC-APLI-TIMS-TOFMS/GC-EI-MS". (submitted). Anal. Chem.
Paduani, M. (2020). Microplastics as novel sedimentary particles in coastal wetlands: A review. Marine Pollution Bulletin, 161, 111739. doi:10.1016/j.marpolbul.2020.111739.
Perez C.M., Felty Q., Yoo C." Novel ID3 Regulatory Gene Networks Contributing to Brain Vascular Disease." Toxicological Sciences 174(1); 84, March 2020.
Peña, F.; Nardi, F.; Melesse, A.; Obeysekera, J.; Assessing geomorphic floodplain models for large scale coarse resolution 2D flood modelling in data scarce regions. Geomorphology 2020 (Under review)
Peña, F.; Nardi, F. Floodplain Terrain Analysis for Coarse Resolution 2D Flood Modeling. Hydrology 2018, 5(4), 52; https://doi.org/10.3390/hydrology5040052
Pierce J.L., Lauretta M.V., Rezek R.J., Rehage J.S., 2020. "Survival of Florida Largemouth Bass in a coastal refuge habitat across years of varying drying severity". Transactions of the American Fisheries Society. 10.1002/tafs.10274
Presa-Reyes M., Bogosian B., Schonhoff B., Jerauld C., Moreyra C., Gardinali P., Chen S.C.,"A Water Quality Research Platform for the Near-real-time Buoy Sensor Data," The 21st IEEE International Conference on Information Reuse and Integration for Data Science (IEEE IRI 2020), Tuscany Hotel, Las Vegas, Nevada, USA, pp. 287-294, August 11-13, 2020.
Presa-Reyes M., Chen S.C, "Assessing Building Damage by Learning the Deep Feature Correspondence of Before and After Aerial Images," IEEE 3rd International Conference on Multimedia Information Processing and Retrieval, Shenzhen, Guangdong, China, pp. 43-48, August 6-8, 2020.
Quinete NS, Hauser-Davis RA, Lemos LS, Moura JF, Siciliano S, Gardinali PR. Occurrence and tissue distribution of organochlorinated compounds and polycyclic aromatic hydrocarbons in Magellanic penguins (Spheniscus magellanicus) from the Southeastern coast of Brazil. Science of the Total Environment 749:141473.
Regier, P., Larsen, L., Cawley, K., Jaffé, R., Linking hydrology and dissolved organic matter characteristics in a subtropical wetland: a long-term study of the Florida Everglades. Global Biogeochemical Cycles (in press). DOI: 10.1029/2020GB006648.
Rezek, Ryan J., Jordan A. Massie, James A. Nelson, Rolando O. Santos, Natasha M. Viadero, Ross E. Boucek, and Jennifer S. Rehage. In press. Individual consumer movement mediates food web coupling across a coastal ecosystem. Ecosphere.
Rodríguez-Casariego, Javier A., Mercado-Molina Alex E., Garcia-Souto Daniel, Ortiz-Rivera Ivanna M., Lopes Christian, Baums Iliana B., Sabat Alberto M., Eirin-Lopez Jose M. Genome-Wide DNA Methylation Analysis Reveals a Conserved Epigenetic Response to Seasonal Environmental Variation in the Staghorn Coral Acropora cervicornis. Frontiers in Marine Science, 2020, 7, 822. DOI: 10.3389/fmars.2020.560424
Smith, M.A., Kominoski, J.S., Gaiser, E.E., Price, R.M., & Troxler, T.G. (2020). Stormwater runoff and tidal flooding transform dissolved organic matter composition and increase bioavailability in urban coastal ecosystems. Journal of Geophysical Research: Biogeosciences. In Review.
Strickland, B.A. et al 2020. Variation in movement behavior of alligators in response to a major hurricane. Journal Of Animal Biotelemetry (Under Review)
Van Dam, B.R., Lopes, C.C., Polsenaere, P., Barreras-Apodaca A., Sanchez-Mejia Z.M., Tokoro T., Kuwae T., Gutierrez-Loza L. Rutgersson A. (2020) "Global trends in air-water CO2 exchange over seagrass meadows revealed by atmospheric Eddy Covariance".Earth and Space Science. https://doi.org/10.1002/essoar.10504484.1
Van Dam, B.R., Lopes, C.C., Polsenaere, P., Price, R.M., Rutgersson, A. and Fourqurean, J.W. (2020), Water temperature control on CO2 flux and evaporation over a subtropical seagrass meadow revealed by atmospheric eddy covariance. Limnol Oceanogr. https://doi.org/10.1002/lno.11620
Zeller, M. A., Van Dam, B. R., Lopes, C., & Kominoski, J. S. (2020). Carbonate-associated organic matter is a putative FDOM source in a subtropical seagrass meadow. Frontiers in Marine Science, 7, 947.
- 2019 Publications
Abiy A.Z., Melesse A.M., Abtew W. "Teleconnection of Regional Drought to ENSO, PDO, and AMO: Southern Florida and the Everglades". Atmosphere (2019), 10, 295
Abiy A.Z., Melesse A.M., Abtew W., Whitman D. (2019). "Rainfall trend and variability in Southeast Florida: Implications for freshwater availability in the Everglades." PLoS ONE. 14 (2).
Beal A.P., Kiszka J.J., Wells R.S. and Eirin-Lopez J.M. (2019) "The Bottlenose Dolphin Epigenetic Aging Tool (BEAT): A Molecular Age Estimation Tool for Small Cetaceans". Front. Mar. Sci. 6:561.
Castellanos A., Ramirez C., Michalkova V., Nouzova M., Noriega F., Fernandez-Lima F. (2019). "Three Dimensional Secondary Ion Mass Spectrometry Imaging (3D-SIMS) of Aedes aegypti ovarian follicles". Journal of Analytical Atomic Spectrometry.
Eggenberger C.W., Santos R.O., Frankovich T.A., James W.R., Madden C.J., Nelson J.A., Rehage J.S.(2019) "Coupling telemetry and stable isotope techniques to unravel movement: Snook habitat use across variable nutrient environments". Fisheries Research.
Erin-Lopez J.M., Putnam H.M. "Annual Review of Marine Science, Marine Environmental Epigenetics". Annu. Rev. Mar. Sci. 2019. 11:7.1–7.34.
Gesesse, A.A. Melesse, AM., Abera. F. Abiy. AZ. 2019. Modeling Hydrological Responses to Land Use Dynamics, Choke, Ethiopia, Water Conservation Science and Engineering, DOI: 10.1007/s41101-019-00076-3
Gessesse, A.A., Assefa M. Melesse & Anteneh Z. Abiy (2019) Land use dynamics and base and peak flow responses in the Choke mountain range, Upper Blue Nile Basin, Ethiopia, International Journal of River Basin Management, DOI: 10.1080/15715124.2019.1672700
Leyva D., Valadares L., Porter J., Wolff J., Jaffè R., Fernandez-Lima F. (2019). "Understanding the Structural Complexity of Dissolved Organic Matter: isomeric diversity." Faraday Discussions.
Regier P., Briceño H., Boyer J.N. (2019) "Analyzing and comparing complex environmental time series using a cumulative sums approach". MethodsX. Vol. 6, pg 779-787.
Moncada A. (2019) Theme 4: "What Does Diversity Require of Us?". Fisheries, 44: 373-374.
Suarez-Ulloa V., Rivera-Casas C., Michel M., Eirin-Lopez JM. "Seasonal DNA methylation variation in the flat tree oyster Isognomon Alatus from a mangrove ecosystem in north Biscayne Bay, Florida" Journal of Shellfish Research, Vol. 38, No. 1, 1–10, 2019.
Torres A., Reis G., Absten J., Bricen H.O., Bobadilla L., Smith R.N. (2019). Correlating Water Quality and Profile Data in the Florida Keys. OCEANS: Conference & Exposition, Seattle 2019. (ACCEPTED)
Van Dam, B. R., Lopes, C., Osburn, C. L., and Fourqurean, J. W.: Net heterotrophy and carbonate dissolution in two subtropical seagrass meadows, Biogeosciences, 16, 4411–4428, https://doi.org/10.5194/bg-16-4411-2019, 2019.
Yanez, Tiffany. The Effects of Copper Exposure on Fish Locomotory and Predator-Prey Interactions. (2019). Florida International University.
- 2018 Publications
Banisakher D., Presa-Reyes M.E., Eisenberg J.D., Allen J., Finlayson M.A., Price R., Chen S.C. " Ontology-Based Supervised Concept Learning for the Biogeochemical Literature," 2018 IEEE International Conference on Information Reuse and Integration (IRI), Salt Lake City, UT, 2018, pp. 402-410.
Beal A., Rodriguez-Casariego J.A., Rivera-Casas C., Suarez-Ulloa V., Eirin-Lopez J.M. #71 " Environmental Epigenomics and Its Applications in Marine Organisms".
Benigni, P., Porter, J., Ridgeway, M.E., Park, M.A., Fernandez-Lima F. “ Increasing Analytical Separation and Duty Cycle with Nonlinear Analytical Mobility Scan Functions in TIMS-FT-ICR MS” Anal. Chem., 2018, 90 (4), pp 2446–2450.
Joshua Eisenberg. Automatic Extraction of Narrative Structure from Long Form Text. (2018). Florida International University.
Hernández-Delgado E.A., Mercado-Molina A.E., Suleimán-Ramos S.E., and Lucking, M.A. (March
28th Perez, Christian M., M. Doke, C. Yoo, and Q. Felty (2018). "Molecular determinants of brain vascular disorders from exposure to polychlorinated biphenyls." The Toxicologist: Supplement to Toxicological Sciences. 162 (1), Abstract no. 2127. ISSN: 1096-6080
Rodriguez‐Casariego J.A., Ladd M.C., Shantz A.A., Lopes C., Cheema M.S., Kim B., Roberts S.B., Fourqurean JW, Ausio J, Burkepile DE, Erin-Lopez JM." Coral epigenetic responses to nutrient stress: Histone H2A.X phosphorylation dynamics and DNA methylation in the staghorn coral Acropora cervicornis " . Ecol Evol. 2018; 00:1–15.
Smith, Abraham Jeffrey. Development and Application of Aquatic Toxicology Studies for the Assessment of Impacts Due to Chemical Stressors Using Non-Standard Indigenous Organisms. (2018). Florida International University.
Tose L.V., Benigni P., Leyva D., Sundberg A., Ramírez C.E., Ridgeway M.E. (2018). Coupling trapped ion mobility spectrometry to mass spectrometry: trapped ion mobility spectrometry–time-of-flight mass spectrometry versus trapped ion mobility spectrometry–Fourier transform ion cyclotron resonance mass spectrometry. Rapid Communications in Mass Spectrometry. 32 (15), 1287.
- 2017 Publications
Benigni, P., Marin, R. Sandoval, K., Gardinali, P., Fernandez-Lima, F., "Chemical Analysis of Water-accommodated Fractions of Crude Oil Spills Using TIMS-FT-ICR MS" Journal of Visualized Experiments (JOVE)
2017 , Issue 121, e55325. Benigni, P., Sandoval, K., Thompson, C.J., Ridgeway, M.E., Park, M.A., Gardinali, P., Fernandez-Lima, F., "Analysis of Photoirradiated Water Accommodated Fractions of Crude Oils Using Tandem TIMS and FT-ICR MS" Environmental Science & Technology 2017, Vol. 51 (11), pp 5978-5988
.
Eisenberg, J.D., Banisakher, D., Presa, M., Unthank, K., Finlayson, M., Price, R., & Chen, S.C., "Toward Semantic Search for the Biogeochemical Literature" IEEE International Conference on Information Reuse and Integration (IRI) 2017, pp 517-525.Gonzalez-Raymat, H., Liu, G.L., Liriano, C., Li, Y.B., Yin, Y.G., Shi, J.B., Jiang, G.B., Cai, Y., "Elemental mercury: Its unique properties affect its behavior and fate in the environment" Environmental Pollution 2017, Vol. 229, pp 69-86.
Gonzalez-Romero, R., Suarez-Ulloa, V., Rodriguez-Casariego, J., Garcia-Souto, D., Diaz, G.,Smith, A., Pasantes, J.J., Rand, G., Eirin-Lopez, J.M., "Effects of Florida Red Tides on Histone variant expression and DNA methylation in the Eastern oyster Crassostrea
virginica " Aquatic Toxicology 2017, Vol. 186, pp 196–204.Pouyanfar, S., and Chen, S.C. "T-LRA: Trend-based Learning Rate Annealing for Deep Neural Networks" IEEE Third International Conference on Multimedia Big Data 2017, pp 50-57.
Prego-Faraldo, M.V., Vieira, L.R., Eirin-Lopez, J.M., Mendez, J., Guilhermino, L., "Transcriptional and biochemical analysis of antioxidant enzymes in the mussel Mytilus
galloprovincialis during experimental exposures to the toxic dinoflagellate Prorocentrum lima" Marine Environmental Research 2017, Vol. 129, pp 304-315.Regier, P. “Linking Organic Matter Dynamics to Management, Restoration, and Climate in the Florida Everglades” (2017) FIU Electronic Theses and Dissertations.3385.
Rivera-Casas, C., Gonzalez-Romero, R., Garduño, R.A., Cheema, M.S.,
Ausio , J., Eirin-Lopez, J.M., "Molecular and Biochemical Methods Useful for the Epigenetic Characterization of Chromatin-Associated Proteins in Bivalve Molluscs" Frontiers inPhysiology 2017, Vol. 8 (490).Tian, H.M., and Chen, S.C. "MCA-NN: Multiple Correspondence Analysis based Neural Network for Disaster Information Detection" IEEE Third International Conference on Multimedia Big Data 2017, pp 268-275.
- 2016 Publications
Flower, H., Rains, M., Lewis, D., Zhang, J., Price, R., "Saltwater intrusion as potential driver of phosphorus release from limestone bedrock in a coastal aquifer" Estuarine, Coastal and Shelf Science 2016, Vol. 184, pp 166-176.
Pouyanfar, S., and Chen, S.C., "Semantic Concept Detection Using Weighted Discretization Multiple Correspondence Analysis for Disaster Information Management" IEEE 17th International Conference on Information Reuse and Integration (IRI) 2016, pp 556-564.
Pouyanfar, S. and Chen S.C., "Semantic Event Detection Using Ensemble Deep Learning" IEEE International Symposium on Multimedia (ISM) 2016, San Jose, CA. pp 203-208.
Sadiq, S., Yan, Y., Shyu, M.L., Chen, S.C., & Ishwaran, H. "Enhancing Multimedia Imbalanced Concept Detection Using VIMP in Random Forests" Proceedings of the IEEE International Conference on Information Reuse and Integration 2016, pp 601–608.
Yan, Y., Zhu, Q., Shyu, M. L., & Chen, S.C. "A classifier ensemble framework for multimedia big data classification" IEEE 17th International Conference on Information Reuse and Integration (IRI) 2016, pp 615-622.
Conference & Meeting Presentations
- 2023 Presentations
Lauren Kabat, Luquillo Long Term Ecological Research Site Proposal Meeting. January 2023
Sara Pezeshk, Smart City Expo Miami. January 2023
James Sturges, FACT Network Winter Meeting. January 2023
Jessica Cardé, Dagny Johnson Key Largo Hammock Botanical State Park Annual Lecture Series, John Pennekamp Coral Reef State Park. February 2023
Jessica Cardé, McKnight Doctoral Annual Fellows Meeting. February 2023
Haley K. Glasmann, FIU Biosymposium. February 2023
Lauren Kabat, Florida International University Biosymposium. February 2023
Alan Mock, FCE Long-Term Ecological Research All Scientists Meeting. February 2023
Kevin Montenegro, FCE All-Scientists Meeting. February 2023
Kevin Montenegro, Florida International University Biosymposium. February 2023
Liz Ortiz Munoz, FIU 2023 Biosymposium. February 2023
Melinda Paduani, Emerging Researchers National Conference. February 2023
Anmanuel Perez, Waste Management Symposia. February 2023
Nicolas Rivas, FIU Biosymposium. February 2023
Jonathan Rodemann, FIU Earth and Environment Graduate Symposium. February 2023
Thomas Shannon, Florida Coastal Everglades Long-Term Ecological Research (FCE-LTER) all-hands meeting. February 2023
Nicole Strickland, McKnight Fellowship Annual Conference. February 2023
Natalie Whitaker-Allen, FIU Biosymposium. February 2023
Ryan James, Gulf of Mexico Conference. February 2023
Nicholas Castillo, FIU Department of Earth and Environment Symposium. March 2023
Nicholas Castillo, FIU University Graduate School Scholarly Forum. March 2023
Nicholas Castillo, Florida Keys National Marine Sanctuary Water Quality Protection Program Conference. March 2023
Nicholas Castillo, Maine Sustainability and Water Conference. March 2023
Lauren Emer, Department of Earth and Environment Graduate Symposium. March 2023
Jazmin Locke, FIU Annual Agroecology Symposium. March 2023
Jazmin Locke, FIU Department of Earth and Environment Graduate Symposium. March 2023
Jazmin Locke, The Nature Conservancy Winter Lecture Series. March 2023
Brianna Martinez, National Meeting of the ACS. March 2023
Himadri Biswas, Greater Everglades Ecosystem Restoration (GEER). April 2023
Casey Butler, Benthic Ecology Meeting. April 2023
Nicholas Castillo, Greater Everglades Ecosystem Restoration Conference. April 2023
Katherine Castrillon, Greater Everglades Ecosystem Restoration (GEER) Conference. April 2023
Marianna Coppola, Benthic Ecology Meeting Society. April 2023
Cody Eggenberger, Greater Everglades Ecosystem Restoration Meeting. April 2023
Nicholas Evans, Benthic Ecology Meeting. April 2023.
Serena Hackerott, Benthic Ecology Meeting. April 2023
Riley Hatch, Annual Benthic Ecology Meeting. April 2023
Danielle Hatt, 51st Annual Benthic Ecology Meeting. April 2023
Joshua Helgoe, 51st annual Benthic Ecology Meeting. April 2023
Samuel Kent, Greater Everglades Ecosystem Restoration conference. April 2023
Alan Mock, Greater Everglades Ecosystem Restoration Conference. April 2023
Kevin Montenegro, Greater Everglades Ecosystem Restoration (GEER) Meeting. April 2023
Melinda Paduani, Greater Everglades Ecological Restoration (GEER) Conference. April 2023
Jezebel Powers, 51st Annual Benthic Ecology Meeting. April 2023
Carlos Pulido, Greater Everglades Ecosystem Services (GEER). April 2023
Nicolas Rivas, Benthic Ecology Meeting. April 2023
Jonathan Rodemann, Greater Everglades Ecosystem Restoration (GEER) Meeting. April 2023
Jonathan Rodemann, Benthic Ecology Meeting. April 2023
Nicole Strickland, Greater Everglades Ecosystem Restoration (GEER) Conference. April 2023
James Sturges, Benthic Ecology Meeting Society. April 2023
Shakira Trabelsi, Benthic Ecology Meeting. April 2023
Rosario Vidales, Greater Everglades Ecosystem Restoration Meeting. April 2023
Natalie Whitaker-Allen, Benthic Ecology Meeting. April 2023
William Wied, Benthic Ecology Meeting. April 2023
Mary Williams, Benthic Ecology Meeting. April 2023
Ryan James, Benthic Ecology Meeting. April 2023
Michael Borbolla, Society for Freshwater Science Annual Conference. May 2023
Michael Borbolla, Symposium on Urbanization and Stream Ecology 6. May 2023
Nicholas Castillo, Florida Chapter American Fisheries Society Conference. May 2023
Cody Eggenberger, Florida Chapter American Fisheries Society Meeting. May 2023
Cassandra Fuller, FIU Annual Biomolecular Sciences Institute Research Symposium. May 2023
Samuel Miller, FIU Biomolecular Science Institute Research Symposium (FIU BSI). May 2023
Jonathan Rodemann, International Conference on Fish Telemetry (ICFT). May 2023
Miguel Santos, FIU Annual Biomolecular Sciences Institute (BSI) Research Symposium. May 2023
Sara Schoen, Atlantic and Gulf Seafood Technology Conference (AGSTC). May 2023
James Sturges, Gordon Research Conference: Movement Ecology. May 2023
Eman Taher, FIU Annual Biomolecular Sciences Institute (BSI) Research Symposium. May 2023
Shakira Trabelsi, Florida American Fisheries Society meeting. May 2023
Lauren Emer, Society for Freshwater Science Meeting. June 2023
Andrew Forero, American Society for Mass Spectrometry annual conference. June 2023
Cassandra Fuller, American Society for Mass Spectrometry annual conference. June 2023
Danielle Hatt, 77th Annual Phycological Society of America (PSA) Meeting. June 2023
Samuel Miller, American Society for Mass Spectrometry (ASMS) 71st Conference. June 2023
Liz Ortiz Munoz, Society for Freshwater Science Conference. June 2023
Melinda Paduani, EcoSummit Conference. June 2023
Miguel Santos, American Society for Mass Spectrometry (ASMS) annual conference. June 2023
James Sturges, International Conference for Fish Telemetry. June 2023
Carolina Cuchimaque Lugo, 59th Annual North American Chemical Residue Workshop. July 2023
Luciana Teresa Dias Cappelini, North American Chemical Residue Workshop (NACRW). July 2023
Maria Guerra de Navarro, North American Chemical Residue Workshop (NACRW). July 2023
Courtney Heath, North American Chemical Residue Workshop (NACRW). July 2023
Leila Soledade Lemos, 59th Annual North American Chemical Residue Workshop. July 2023
Brianna Martinez, Chemistry Education Research & Practice, Gordon Research Seminar & Conference. July 2023
Melinda Paduani, Girl Scouts of Tropical Florida Women in STEM speaker series. July 2023
Nicholas Castillo, Fish and Wildlife Commission meeting. August 2023
Katherine Castrillon, Ecological Society of America (ESA) Conference. August 2023
Janelle Goeke, Ecological Society of America 2023 meeting. August 2023
Melinda Paduani, Ecological Society of America (ESA) Annual Conference. August 2023
Brandon Sosa, International Society of Ecological Economics (ISEE). August 2023
Nicole Strickland, Ecological Society of America (ESA) Annual Conference. August 2023
Miguel Valencia, Florida Groundwater Conference. August 2023
Rosario Vidales, Ecological Society of America Meeting. August 2023
Katherine Castrillon, Florida Native Plant Society meeting. September 2023
Milena Ceccopieri da Rocha, 19th Annual workshop on Emerging High-Resolution Mass Spectrometry and LC/MS/MS Applications in Environmental and Food Analysis. September 2023
Carolina Cuchimaque Lugo, 19th Annual Workshop on Emerging HRMS & LC-MS/MS Applications in Environmental Analysis & Food Safety. September 2023
Luciana Teresa Dias Cappelini, 19th Annual Workshop on Emerging HRMS & LC-MS/MS Applications in Environmental Analysis & Food Safety. September 2023
Maria Guerra de Navarro, 19th Annual Workshop on Emerging HRMS & LC-MS/MS Applications in Environmental Analysis & Food Safety. September 2023
Courtney Heath, 19th Annual LC-MS/MS Workshop. September 2023
Stefanie Landeweer, 19th Annual Workshop on Emerging HRMS & LC-MS/MS Applications in Environmental Analysis & Food Safety. September 2023
Leila Soledade Lemos, LC-MS/MS Workshop on Environmental Analysis and Food Safety. September 2023
Olutobi Daniel Ogunbiyi, 19th Annual Workshop on Emerging HRMS and LC-MS/MS applications in Environmental Analysis and food safety. September 2023
Cesar Rojas, IEEE Oceans Gulf Coast Conference. September 2023
Cesar Rojas, FIU Wilson Scholars & Roles Models meeting. September 2023
Kassidy Troxell, LC-MS/MS Workshop. September 2023
Casey Butler, International Conference & Workshop on Lobster Biology and Management. October 2023
Sophia Costa, Upper Keys Fishing Guide Association Annual Meeting. October 2023
Miguel Valencia, GSA Annual Meeting. October 2023
Gina Badlowski, Coastal and Estuarine Research Federation Conference. November 2023
Mason Bradbury, SEDAAG Annual Meeting. November 2023
Nicholas Castillo, SETAC North America. November 2023
Milena Ceccopieri da Rocha, North America Annual Meeting of the Society of Environmental Toxicology and Chemistry (SETAC). November 2023
Marianna Coppola, Coastal and Estuarine Research Foundation (CERF). November 2023
Sophia Costa, Gulf and Caribbean Fisheries Institute Conference. November 2023
Carolina Cuchimaque Lugo, SETAC North America 44th Annual Meeting. November 2023
Luciana Teresa Dias Cappelini, SETAC North America 44rd Annual Meeting. November 2023
Maria Guerra de Navarro, SETAC North America 44th Annual Meeting. November 2023
Courtney Heath, SETAC North America 44th Annual Meeting. November 2023
Stefanie Landeweer, Society of Environmental Toxicology and Chemistry (SETAC) North America 44th Annual Meeting. November 2023
Leila Soledade Lemos, Society of Environmental Toxicology and Chemistry (SETAC) North America 44th Annual Meeting. November 2023
Samuel Miller, Society of Forensic Toxicologists (SOFT). November 2023
Joshua Ocheje Omaojo, The Society of Environmental Toxicology and Chemistry (SETAC) North America 44th Annual Meeting. November 2023
Olutobi Daniel Ogunbiyi, SETAC NORTH American 44th annual meeting. November 2023
Mayowa Ezekiel Oladipo, SETAC North America 44th Annual Meeting. November 2023
Peter Oladoye, SETAC North America 44th Annual Meeting. November 2023
Melinda Paduani, Chesapeake Bay Plastic Pollution Action Team meeting. November 2023
Rodrigo Andres Restrepo Osorio, SETAC 44th Annual Meeting. November 2023
Thomas Shannon, FIU Everglades Restoration Taskforce Meeting Reception Event in DC. November 2023
Shakira Trabelsi, SETAC North America Annual Meeting. November 2023
Kassidy Troxell, North America 43rd Annual Meeting of the Society of Environmental Toxicology and Chemistry (SETAC). November 2023
Ryan James, Coastal and Estuarine Research Federation. November 2023
Jessica Cardé, Sea Grant Biscayne Bay State of the Science Workshop, International Center for Tropical Botany at The Kampong. December 2023
Jose Fuentes, IEEE CDC 2023 conference. December 2023
- 2022 Presentations
Marcel Bozas, RECOVER (Restoration Coordination & Verification) Multi-agency meeting. January 10, 2023
Juliet M. Wong, NOAA Northwest Fisheries Science Center (NWFSC) Monster Seminar Jam Series (virtual). January 20, 2022
Melinda Paduani, Miami Plastic Patrol MWK x DFO Training. January 26, 2022
Nicholas Castillo, Miami International Boat Show Conservation Speaker. February 2022
Samuel Kent, FIU Earth and Environment Research Symposium. February 2022
Melissa Lau, American Association of Geographers 2022 Virtual Conference. February 2022
Paulo Padrao Lopes, IEEE Oceans conference (virtual). February 2022
Cesar A. Rojas, IEEE Oceans conference. February 2022
Francisco Febronio Peña Guerra, UF Water Institute Symposium. February 2022
Nicholas Castillo, FIU study finds pharmaceutical contaminants in bonefish, Florida Politics. February 2, 2022
Nicholas Castillo, The Search for What’s Harming Florida’s Beloved Bonefish, Hakai Magazine. February 2, 2022
Nicholas Castillo, Bonefish on Drugs, Garden & Gun Magazine. February 2, 2022
Nicholas Castillo, 58 Different Pharmaceutical Contaminants Found in Florida’s Bonefish, Field & Stream Conservation magazine. February 2, 2022
Marbelys Garriga, Ocean Studies Charter School STEAM Fair. February 3, 2022
Nicholas Castillo, Cocktail of drugs taint bonefish in Biscayne Bay and Keys, The Miami Herald and Yahoo! News. February 4, 2022
Nicholas Castillo, Florida House Speaker talks water conservation following release of FIU bonefish study, News Break – Florida Politics. February 4, 2022
Casey B. Butler, FIU Biosymposium. February 5, 2022
Jessica Cardé, FIU Biosymposium. February 5, 2022
Peter Flood, FIU Biosymposium. February 5, 2022
Laura García Barcia, FIU Biosymposium, February 5, 2022
Riley Hatch, FIU Biosymposium. February 5, 2022
Liz D. Ortiz Munoz, FIU Biosymposium. February 5, 2022
Allison White, Florida International University Biosymposium. February 5, 2022
Nicholas Castillo, Florida’s Bonefish Are Riddled With Human Drugs. The Atlantic. February 6, 2022
Nicholas Castillo, Drugs found in bonefish from Biscayne Bay to Marquesas, Florida Keys Free Press. February 9, 2022
Nicholas Castillo, Pharmaceuticals in our bonefish. National Public Radio – WLRN South Florida Roundup. February 14, 2022
Mason Bradbury, FIU, Earth & Environment Graduate Symposium, virtual. February 18, 2022
Nicole Cordoba, FIU Department of Earth and Environment Graduate Symposium. February 18, 2022
Lauren Emer, FIU Earth and Environment Graduate Symposium. February 18, 2022
Samuel Kent, FIU Earth and Environment Graduate Symposium. February 18, 2022
Nicholas Castillo, Pills in gills: Prescription drugs discovered in Florida Fish, NBC-2 South Florida News. February 21, 2022
Daniela Brigitte Daniele, UF Water Institute Symposium. February 23, 2022
Mason Bradbury, AAG Annual Meeting 2022 (virtual). February 25, 2022
Nicholas Castillo, American Fisheries Society Florida Chapter. March 2022
Anahita Esmaeilian, ACS National Meeting. March 2022
Nicholas Castillo, FIU University Graduate School Scholarly forum. March 2022
Nicole Cordoba, Florida Coastal Everglades All Scientists Meeting. March 2, 2022
Ikechukwu Onwuka, FCE LTER All Scientists Meeting. March 2, 2022
Anahita Esmaeilian, ACS (American Chemical Society) National Meeting. March 2022
Nicholas Evans, Benthic Ecology Meeting. March 2022
Afia Anjuman, FIU Chemistry and Physics Visitation Day. March 11, 2022
Christian Perez, Society of Toxicology conference. March 29, 2022
Jonathan Rodemann, Ocean Sciences Meeting (virtual). March 2022
Thomas Shannon, Florida Coastal Everglades LTER- 2022 All Scientists Meeting. March 2022
Jazmin Locke, Scholarly forum by FIU University Graduate School (UGS). April 5, 2022
Marcel Bozas, FIU Analysis of South Florida Ecosystems guest lecture. April 6, 2022
Nicholas Castillo, Florida Bay Forever Brunch on the Bay. April 2022
Jonathan Rodemann, Florida Chapter meeting of the American Fisheries Society. April 2022
Javier A. Rodriguez Casariego, SAM-PR meeting. April 2022
Mack White, Annual Meeting of the Florida Chapter American Fisheries Society. April 2022
Mary Williams, Benthic Ecology Meeting. April 2022
Marcel Bozas, Native American Fish and Wildlife Society (NAFWS) Annual National Conference. May 2022
Jessica Cardé, Southeast and Mid-Atlantic Marine Mammal Symposium. May 2022
Nicholas Castillo, Fact Network Conferences. May 2022
Melanie Esch, International Conference for Aquatic Invasive Species (virtual). May 2022
Francisco Febronio Peña Guerra, Association of State Floodplain Managers. May 2022
Xuerong Li, SETAC Focused Topic Meeting. May 2022
Kassidy Troxell, Nontarget Analysis for Environmental Risk Assessment session hosted by the Society of Environmental Toxicology and Chemistry (SETAC). May 2022
Lauren Kabat, Joint Aquatic Sciences Meeting. May 16, 2022
Jazmin Locke, Joint Aquatic Science Meeting. May 16, 2022
Alan Mock, Joint Aquatic Sciences Meeting. May 16, 2022
Ryan James, FACT Network meeting. May 17, 2022
Lauren Emer, Joint Aquatic Sciences Meeting. May 20, 2022
Peter Flood, Joint Aquatic Sciences Meeting. May 20, 2022
Danielle Hatt, Joint Aquatic Sciences Meeting. May 20, 2022
Lowell Iporac, Joint Aquatic Sciences Meeting. May 20, 2022
Ikechukwu Onwuka, Joint Aquatic Science Meeting. May 20, 2022
Liz D. Ortiz Munoz, Joint Aquatic Science Meeting. May 20, 2022
Samuel Miller, FIU Biomolecular Science Institute Research Symposium. May 31, 2022
Jonathan Rodemann, FACT Network summer meeting. May 2022
Cassandra Fuller, ASMS (American Society of Mass Spectrometry) annual conference. June 2022
Dennys Leyva, ASMS (American Society of Mass Spectrometry) annual conference. June 2022
Samuel Miller, American Society for Mass Spectrometry (ASMS). June 2022
Miguel Santos-Fernandez, American Society for Mass Spectrometry (ASMS). June 2022
Stormie Collins, The Crustacean Society meeting. June 2022
Jazmin Locke, Seminar for Curtis and Rogers Landscape Architecture Firm. June 9, 2022.
Cassandra Fuller, FIU Annual Biomolecular Sciences Institute Research Symposium (BSI). June 22, 2022
Miguel Santos-Fernandez, FIU Annual Biomolecular Sciences Institute Research Symposium (BSI). June 22, 2022
Afia Anjuman, ICMGP 2022 – International Conference on Mercury as a Global Pollutant. July 2022
Katherine Castrillon, Botany Conference. July 2022
Melanie Esch, International Coral Reef Symposium. July 8, 2022
Serena Hackerott, International Coral Reef Symposium. July 8, 2022
Lauren Emer, Association for Tropical Biology meeting. July 14, 2022
Miguel Santos-Fernandez, International Conference on Ion Mobility Spectrometry (ISIMS). July 2022
Brianna L. Martinez, Biennial Conference on Chemical Education. August 1, 2022
Jessica Cardé, Conference on the Biology of Marine Mammalogy. August 2022
Peter Flood, Ecological Society of America. August 2022
Cassandra Fuller, FLACS FAME. August 2022
Samuel Miller, American Chemical Society 98th Florida Annual Meeting and Exposition (ACS FAME). August 2022
Jonathan Rodemann, International Seagrass Biology Workshop. August 2022
Miguel Santos-Fernandez, American Chemical Society Florida Section (FAME). August 2022
Eman Taher, 24th Biennial Conference on the Biology of Marine Mammals. August 2022
Kristine Zikmanis, Ecological Society of America. August 2022
Melinda Paduani, Miami Plastic Patrol x Dream In Green x Miami-Dade Teachers Training (virtual). September 10, 2022
Tommy Shannon, FCE LTER All-Scientists Meeting. September 22, 2022
Serena Hackerott, Reef Futures Conference. September 28, 2022
Cesar A. Rojas, GEM Annual Board Meeting and Conference. September 2022
Mack White, NSF-LTER All-Scientist Meeting. September 2022
Milena Ceccopieri da Rocha, Southeastern Regional Meeting of the American Chemical Society (SERMACS). October 2022
Haley K. Glasmann, SEAC (Southeast Acoustics Consortium). October 2022
Samuel Miller, Society of Forensic Toxicologists (SOFT). October 2022
Javier A. Rodriguez-Casariego, Aquatic Models in Human Disease. October 2022
Kassidy Troxell, Southeastern Regional Meeting of the American Chemical Society (SERMACS). October 2022
Allison White, 7th Southeast Area Acoustics Consortium Conference. October 11, 2022
Kelcie L. Chiquillo, Epigenetics in Marine and Aquatic Biology Conference (EpiMar). October 12, 2022
Serena Hackerott, Epigenetics in Marine and Aquatic Biology Conference (Epimar). October 12, 2022
Javier A. Rodriguez-Casariego, Epimar conference. October 2022
Nicholas Castillo, Suncoast Water Keeper Guest Speaker. October 15, 2022
Stefanie Landeweer, Southeastern Regional Meeting of the American Chemical Society (SERMACS). October 20, 2022
Cesar A. Rojas, IEEE Oceans conference. October 2022
Nicholas Tucker, Southeast Acoustics Consortium. October 2022
Juliet M. Wong, Epigenetics in Marine and Aquatic Biology Conference (EPIMAR). October 2022
Kristine Zikmanis, National Estuarine Research Reserves Meeting. October 2022
Tommy Shannon, Global Lakes Ecological Observation Network (GLEON) All-Hands Meeting. November 3, 2022
Ryan James, Bonefish & Tarpon Trust Science Symposium and Flats Expo. November 4, 2022
Elena Tugusheva, Innovation & Fast Prototyping Workshop at FIU. November 8, 2022
Mark Annunziato, SETAC North America. November 2022
Nicholas Castillo, Bonefish and Tarpon Trust Symposium. November 2022
Cody Eggenberger, Bonefish and Tarpon Trust Symposium. November 2022
Maria E. Guerra de Navarro, SETAC North America 43rd Annual Meeting. November 2022
Lowell Iporac, 75th Annual Gulf and Caribbean Fisheries Institute Conference. November 2022
Leila Soledade Lemos, Society of Environmental Toxicology and Chemistry (SETAC) North America 43rd Annual Meeting. November 2022
Xuerong Li, SETAC North America 43rd Annual Meeting. November 2022
Olutobi Daniel Ogunbiyi, SETAC North America 43rd Annual Meeting. November 2022
Peter Oladoye, SETAC North America 43rd Annual Meeting. November 2022
Kassidy Troxell, North America Annual Meeting of the Society of Environmental Toxicology and Chemistry (SETAC). November 2022
Ryan James, University of Memphis seminar. November 10, 2022
Stefanie Landeweer, SETAC North America. November 14, 2022
Jazmin Locke, FIU Agroecology high school immersion day. November 14, 2022
Jonathan Rodemann, Ocean Tracking Network Symposium. November 2022
Shakira Trabelsi, Bonefish and Tarpon Trust 7th International Science Symposium. November 2022
Kelcie L. Chiquillo, Biology Seminar at the University of Puerto Rico. December 13, 2022
Jose Fuentes, IEEE IRC conference. December 2022
Jonathan Rodemann, FACT Network winter meeting. December 2022
James Sturges, FACT Network Winter Meeting. December 2022
- 2021 Presentations
Francisco Febronio Peña Guerra, International Conference on Hydroinformatics. January 2021
Camilo Roa, Southern Division American Fisheries Society Conference. January 22, 2022
Anne Sabol, FIU Biosymposium. January 2021
Thomas Shannon, FIU Biosymposium. January 2021
Mason Bradbury, Deering Symposium (virtual). February 2, 2021
Lowell Iporac, 1st Annual Deering Estate Symposium (virtual). February 2021
Mason Bradbury, FIU Earth & Environment Graduate Symposium (virtual). February 19, 2021
Angelica Moncada, FIU Department of Earth and Environment Symposium. February 2021
Ikechukwu Onwuka, FIU Earth and Environment Graduate Research Symposium. February 2021
Sara Pezeshk, TNOC Festival. February 2021
Lowell Iporac, 12th International Phycological Congress (virtual). March 2021
Lowell Iporac, Undergraduate Research FIU Conference (virtual). March 2021
Christian Perez, Society of Toxicology 61st Annual Meeting. March 2022
Marcel Bozas, Greater Everglades Ecosystem Restoration (GEER) Virtual Conference. April 2021
Mason Bradbury, AAG Annual Meeting (virtual). April 10, 2021
Nicholas Castillo, GEER conference. April 2021
Cody Eggenberger, Greater Everglades Ecosystem Restoration Meeting (virtual). April 2021
Anahita Esmaeilian, European Geoscience Union-General Assembly, Virtual conference. April 2021
Lowell Iporac, Greater Everglades Ecosystem Restoration Conference (virtual). April 2021
Dennys Leyva, FIU Virtual Graduate Student Appreciation Week. April 2021
Brianna L. Martinez, 261st National Meeting of the ACS, Virtual. April 2021
Brian Ng, Southeast Florida Coral Reef Initiative (SEFCRI) Technical Advisory Meeting. April 2021
Jazmin Locke, Greater Everglades Ecosystem Restoration (GEER) Conference. April 2021
Ikechukwu Onwuka, Greater Everglades Ecosystem Restoration (virtual). April 2021
Christian Perez, Annual Biomolecular Sciences Institute Research Symposium. April 2021
Sara Pezeshk, UM Symposium on Tropical and Subtropical Coastal Resilience. April 2021
Ryan James, Greater Everglades Ecosystem Restoration. April 2021
Mary Williams, Annual Benthic Ecology Meeting in Portsmouth. April 2021
Mason Bradbury, SFS Annual Meeting 2021 (virtual). May 25, 2021
Lauren Emer, Society for Freshwater Science Annual Meeting (virtual). May 2021
Melissa Lau, Society of Freshwater Science 2021 Virtual Conference. May 2021
Ikechukwu Onwuka, Society for Freshwater Science Annual Meeting (virtual). May 2021
Sara Pezeshk, 8th International Conference on Architecture and Built Environment. May 2021
Javier A. Rodriguez Casariego, ALSO Ocean Sciences Meeting. June 2021
Matthew Smith, Association for the Sciences of Limnology and Oceanography Virtual Meeting. June 2021
Marcel Bozas, Miccosukee Tribal Meeting on Deer Management. July 2021
Laura García Barcia, American Elasmobranch Society (virtual). July 2021
Marbelys Garriga, Meet the Scientist at FIU Camp Discover. July 9, 2021
Ikechukwu Onwuka, Everglades Foundation Annual Symposium. Summer 2021
Afia Anjuman, Sci-Mix session at ACS Fall 2021. August 23, 2021
Anahita Esmaeilian, ACS Fall 2021 Virtual Meeting & Expo. August 2021
Afia Anjuman, ACS Fall 2021 National Meeting & Exposition. August 25, 2021
Melinda Paduani, Ecological Society of America Annual Meeting. August 2021
Valeria Paz, Ecological Society of America Annual meeting (virtual). August 2021
Marbelys Garriga, Lake Worth Lagoon Initiative Water Resources Working Group. October 14, 2021
Leila Soledade Lemos, FLUOROS Global Conference. October 2021
Xuerong Li, 17th Annual Workshop on Emerging High-Resolution Mass Spectrometry (HRMS) and LC-MS/MS Applications in Environmental Analy sis and Food Safety. October 2021
Nicholas Castillo, FIU Earth and Environment Department 3 Minute Thesis Competition. Fall 2021
Cassandra Fuller, ASMS Conference on Mass Spectrometry and Allied Topics. Fall 2021
Dennys Leyva, ASMS virtual meeting. Fall 2021
Clement Ajibade Olanrewaju, American Society of Mass Spectrometry (ASMS). Fall 2021
Matthew Smith, American Shore and Beach Preservation Association panel. Fall 2021
Kassidy Troxell, Presentations to DERM representatives and Biscayne Bay Board of Directors. Fall 2021
Nicholas Castillo, FIU UGS 10 minute PhD talk in Earth and Environment. Fall 2021
Marcel Bozas, FWC Quarterly Meeting (virtual). November 2021
Danni Cui, SETAC North America 42nd Annual Meeting. November 2021
Cody Eggenberger, Ocean Tracking Network Symposium (virtual). November 2021
Stefanie Landeweer, SETAC North America annual meeting. November 2021
Leila Soledade Lemos, SETAC North America 42nd Annual Meeting, virtual. November 2021
Xuerong Li, SETAC North America 42nd Annual Meeting. November 2021
Jazmin Locke, Coastal and Estuarine Research Federation (CERF) Biannual Virtual Conference. November 11, 2021
Jazmin Locke, International Conference on Environment and Society. November 22, 2021
Brian Ng, SETAC North America 42nd Annual Meeting, SciCon4. November 2021
Olutobi Daniel Ogunbiyi, SETAC North America 42nd Annual Meeting. November 2021
Ikechukwu Onwuka, International Conference on Environment and Society (virtual). November 2021
Francisco Febronio Peña Guerra, International Conference on Environment and Society. November 2021
Francisco Febronio Peña Guerra, Water and Climate Resilience Metrics Workgroup South Florida Water Management District. November 2021
Thomas Shannon, UC-Boulder Diatom Workshop. November 2021
Matthew Smith, Coastal Estuarine and Research Federation Virtual Meeting. November 2021
Kassidy Troxell, SETAC North America 42nd Annual Meeting virtual conference. November 2021
Ryan James, Coastal and Estuarine Research Federation meeting. November 2021
Nicole Cordoba, American Geophysical Union meeting. December 2021
Anahita Esmaeilian, American Geoscience Union-General Assembly. December 2021
Dennys Leyva, IEEE International Conference on Bioinformatics and Biomedicine. December 2021
Francisco Febronio Peña Guerra, American Geophysical Union Annual Meeting. December 2021
Ryan James, Department of Biological Sciences, Walla Walla University Virtual Colloquium. 2021
- 2020 Presentations
Lowell Iporac, Broward Shell Club Meeting. February 2020
Christian Perez, Stempel College 2nd Annual Research Day. February 14, 2020
Christian Perez, 59th Annual Society of Toxicology Conference. March 13, 2020
Christian Perez, EHS Departmental Seminar. March 2020
Lowell Iporac, Meeting of Graduate Student Research at the Deering Estate. May 2020
Dennys Leyva, ASMS 2020 reboot Conference. June 1, 2020
Dennys Leyva, ASMS 2020 reboot Conference. June 1, 2020
Melinda Paduani, Meet the Scientist (MTS) Program visiting researcher presentation, Camp Inspire Virtual Summer Camp. June 29, 2020
Christian Perez, 2020 Annual FIU Biomolecular Sciences Symposium. July 31, 2020
Maria Presa-Reyes, IEEE MIPR 2020. August 5, 2020
Maria Presa-Reyes, IEEE IRI 2020. August 12, 2020
Francisco Pena, ARCH 6041/6051 Research Studio. September 9, 2020
Lowell Iporac, 73nd Annual Meeting of the Gulf and Caribbean Fisheries Institute Punta Cana. November 2020
Lowell Iporac, 42nd Annual Southeast Phycology Colloquium. November 2020
Lowell Iporac, 42nd Annual Southeast Phycology Colloquium. November 2020
Danni Cui, SETAC North America 41st Annual Meeting. November 15, 2020
Kassidy Troxell, SCICON2 SETAC North America 41st Annual Meeting. November 15, 2020
Brian Ng, SETAC North America 41st Annual Meeting. November 15, 2020
Brian Ng, SETAC North America 41st Annual Meeting. November 15, 2020
Xuerong Li, SETAC North America 41st Annual Meeting. November 15, 2020
Nicholas Castillo, Local bonefish are on drugs, Florida Keys Free Press. December 23, 2020
Francisco Pena, American Geophysical Union Fall Meeting. December 2020
Daniela Daniele, Annual meeting of the Society for Freshwater Science. 2020
Melissa Lau, Annual meeting of the Society for Freshwater Science. 2020
Javier Rodriguez-Casariego, Ocean Sciences Meeting. 2020
Javier Rodriguez-Casariego, HurriCon: Science at the Intersection of Hurricanes and the Populated Coast. 2020
Clement Olanrewaju, Annual American Society for Mass Spectrometry Conference. 2020
Matthew Smith, Ecological Society of America. 2020
Matthew Smith, National Watershed and Stormwater Conference. 2020
Yasir Mamun, Annual American Society for Mass Spectrometry Conference. 2020
Anahita Esmaeilian, ACS Fall 2020 Virtual Meeting & Expo, Moving Chemistry From Bench to Market, USA. 2020
- 2019 Presentations
Lowell Iporac, Biosymposium. February 2, 2019
Serena Hackerott, Biosymposium. February 2, 2019
Matthew Smith, Biosymposium. February 2, 2019
Javier Rodriguez-Casariego, Biosymposium. February 2, 2019
Danielle Ogurcak, Biosymposium. February 2, 2019
Afia Anjuman, American Chemical Society in Orlando, FL. February 20, 2019.
Danielle Ogurcak, Association for the Sciences of Limnology and Oceanography (ASLO) Aquatic Science meeting. February 25, 2019
Alex Mercado, Association for the Sciences of Limnology and Oceanography (ASLO) Aquatic Science meeting. February 25, 2019
Matthew Smith, Urban Resilience to Extremes Sustainability Research Network's All Hands Meeting, Baltimore, MD. March 20, 2019
Melinda Paduani, Association of Marine Labs of the Caribbean 39th Conference. March 24, 2019
Jennie Rivera, American Chemical Society in Orlando, FL. March 25, 2019
Anthony Castellanos, American Society for Mass Spectrometry (ASMS) Conference. April 4, 2019
Cody Eggenberger, Florida Chapter American Fisheries Society Meeting. April 4, 2019
Dennys Leyva, American Society for Mass Spectrometry (ASMS) Conference. April 11, 2019
Christian Perez, National Hispanic Medical Conference. April 12, 2019
Anthony Castellanos, Florida Annual Meeting and Exposition (FAME), Florida Local Section of the American Chemical Society (FLACS). April 24, 2019
Cody Eggenberger, Greater Everglades Ecosystem Restoration (GEER) Meeting. April 24, 2019
Dennys Leyva, Florida Annual Meeting and Exposition (FAME), Florida Local Section of the American Chemical Society (FLACS). April 24, 2019.
Anteneh Abiy, Earth Educators Rendezvous workshop. May 1, 2019
Lowell Iporac, Association of Marine Laboratories of the Caribbean 39th Scientific Conference. May 20, 2019
Clement Olanrewaju, 15th Annual Workshop on LC/MS/MS Applications in Environmental Analysis and Food Safety. May 29, 2019
Brian Ng, 15th Annual Workshop on LC/MS/MS Applications in Environmental Analysis and Food Safety. May 29, 2019
Autumn Henderson, 15th Annual Workshop on LC/MS/MS Applications in Environmental Analysis and Food Safety. May 29, 2019
Alex Mercado Molina, Netlogo Modelling workshop in Germany. May 31, 2019.
Anthony Castellanos, American Society for Mass Spectrometry (ASMS) Conference. June 2, 2019
Clement Olanrewaju, American Society for Mass Spectrometry (ASMS) Conference. June 2, 2019
Dennys Leyva, American Society for Mass Spectrometry (ASMS) Conference. June 2, 2019
Serena Hackerott, MEGA Functional Genomics and Gene Expression Workshop. June 5, 2019
Lowell Iporac, Annual Meeting of the Phycological Society of America. June 24, 2019
Lowell Iporac, 73rd Annual Meeting of the Phycological Society of America. June 25, 2019
Brian Ng, Society of Environmental Toxicology and Chemistry (SETAC). September 17, 2019.
Steven Landeweer, Society of Environmental Toxicology and Chemistry (SETAC). September 17, 2019.
Autumn Henderson, Society of Environmental Toxicology and Chemistry (SETAC). September 17, 2019.
Lowell Iporac, Gulf Coast and Fisheries Institute (GCFI) conference. September 27, 2019.
Marbelys Garriga, VoLo VISTA climate correction conference finalist presentation. September 30, 2019.
Nicholas Castillo, Coastal and Estuarine Research Federation (CERF) conference. October 8, 2019.
Francisco Pena Guerra, Southeast Florida Regional Climate Leadership Summit. December 3, 2019.
- 2018 Presentations
Anthony Castellanos, Annual Symposium. January 26, 2018
Javier Rodriguez-Casariego, Biosymposium. February 3, 2018
Tiffany Yanez, Biosymposium. February 3, 2018
Anthony Castellanos, American Society for Mass Spectrometry Conference. February 20, 2018
Christian Perez, Society of Toxicology conference. March 12, 2018
Anthony Castellanos, Graduate Student Appreciation Week. March 19, 2018
Matthew Smith, Urban Resilience to Extremes Sustainability Research Network All Hands Meeting. March 19, 2018
Christian Perez, Provost Awards Ceremony sponsored by FIU's Graduate School. March 23, 2018
Christian Perez, FIU Graduate Annual Symposium. May 4, 2018
Anthony Castellanos, 66th Conference of the American Society for Mass Spectrometry. June 3, 2018
Autumn Henderson, Society of Environmental Toxicology and Chemistry (SETAC). August 14, 2018
Steven Landeweer, Society of Environmental Toxicology and Chemistry (SETAC). August 15, 2018
Brian Ng, Society of Environmental Toxicology and Chemistry (SETAC). August 15, 2018
Jone Corrales, Society of Environmental Toxicology and Chemistry (SETAC). August 21, 2018
Connor Born, Geologic Society of America conference. September 28, 2018.
Jone Corrales, Association of Ecosystem Research Centers meeting (AERC). October 3, 2018
Javier Rodriguez-Casariego,Association for the Sciences of Limnology and Oceanography (ASLO) Aquatic Science meeting. October 13, 2018
Danielle E. Ogurcak, Association for the Sciences of Limnology and Oceanography (ASLO) Aquatic Science meeting in San Juan. October 17, 2018.
Angelica Moncada, American Geophysical Union meeting. October 25, 2018.
Samuel Kent, American Geophysical Union meeting. October 30, 2018.
Anteneh Abiy, American Geophysical Union meeting. October 31, 2018.
Christian Lopes, Association for the Sciences of Limnology and Oceanography (ASLO) Aquatic Science meeting. November 6, 2018
- 2017 Presentations
Kalli Unthank, Alan Alda Center for Communicating Science Boot Camp. January 19, 2017
Javier Rodriguez-Casariego, Coral Reef Conservation Program CRCP Learning Exchange. January 26, 2017
Paolo Benigni, Emerging Researchers National Conference. January 21, 2017
Jason Howard, ASLO 2017 Aquatic Sciences Meeting. February 26, 2017
Anteneh Abiy, Biosymposium. March 1, 2017
Joshua Allen, Biosymposium. March 1, 2017
Kalli Unthank, Biosymposium. March 1, 2017
Jason Howard, NC Water Resources Research Institute Annual Conference. March 15, 2017
Matthew Smith, Urban Resilience to Extreme Sustainability Research Network UREx-SRN All Hands Meeting. March 21, 2017
Joshua Allen, Greater Everglades Ecosystem Restoration GEER. April 18, 2017
Shu-Ching Chen, IEEE International Conference on Multimedia Big Data. April 20, 2017
Samira Pouyanfar, IEEE International Conference on Multimedia Big Data. April 20, 2017
Deya Banisakher, 30th International FLAIRS Conference. May 23, 2017
Javier Rodriguez-Casariego, Association of Marine Laboratories of the Caribbean AMLC. May 24, 2017
Rosario Vidales, Society of Wetland Scientists SWS Annual Meeting. June 7, 2017
Danielle Ogurcak, Society of Wetland Scientists SWS Annual Meeting. June 7, 2017
Josh Eisenberg, IEEE International Conference on Information Reuse and Integration (IRI). June 19, 2017.
Deya Banisakher, 2017 IEEE International Conference on Information Reuse and Integration _IRI_. August 4, 2017
Abraham Smith, Early Emerging Metazoan Conference. August 11, 2017
Autumn Henderson, SETAC North America 38th Annual Meeting. November 12, 2017
- 2016 Presentations
Shu-Chin Chen, 2016 IEEE 17th International Conference on Information Reuse and Integration. July 2016
Samira Pouyanfar, 2016 IEEE International Symposium on Multimedia. July 2016
Javier Rodriguez-Casariego, Society of Environmental Toxicology and Chemistry SETAC. November 2016
Jose Erin-Lopez, Society of Environmental Toxicology and Chemistry SETAC. November 2016
Facilities & Equipment
We provide computer stations, labs and workspaces on both the Modesto Maidique and Biscayne Bay Campuses at FIU, which are available to all affiliated students, postdocs, faculty and staff.
We also operate the CAChE Nutrient Analysis Lab, which represents three distinct services; first, it serves as a NELAC-accredited nutrient analysis laboratory to directly support research; second, it contains a dedicated student area for education and training related to traditional water quality analyses; and finally, it provides a space where students and faculty can work to improve or innovate technologies, and develop alternative or novel techniques.
Forms & Guides
Logos
Here are the different variations of our standardized logos, plus a guide on how to acknowledge NSF and our posters and/or presentations: Poster/Presentation Acknowledgements Guide.
